Job Description A0PJE2 Confidence 98.52% Date Wed May 9 17:33:15 BST 2012 Rank 276 Aligned Residues 174 % Identity 8% Template c3sxpD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:adp-l-glycero-d-mannoheptose-6-epimerase; PDBTitle: crystal structure of helicobacter pylori adp-l-glycero-d-manno-2 heptose-6-epimerase (rfad, hp0859) Resolution 2.55 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		L	E	V	Q	I	P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	.	.	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		I	D	D	E	L	E	N	Q	T	I	L	I	T	G	G	A	G	F	V	G	S	N	L	A	F	H	F	Q	E	N	H	P	K	A	K	V	V	V	L	D	K	F	R	S	N	P	S	S	L	G	H	F	K	N	L	I	G	F	K	G	E	V	I	A	A	D	I	N	N	P	L	D	L	R	R	L	E	K	L	H
Template Known Secondary structure		S	S				T	T							T	T	T	S															T	T	S																		G	G	G	G	T	T			S							T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	K	Q	E	H	K	L	H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	L	F	H	Q	A	A	V	S	D	T	T	M	L	N	Q	E	L	V	M	K	T	N	Y	Q	A	F	L	N	L	L	E	I	A	R	S	K	K	A	K	V	I	Y	A	S	S	A	G	V	Y	G	N	T	K	A	P	N	V	V	G	K	N	E	S
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										G	G	G												T													T	T									G	G	G	G		S			S	S	B		T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91															.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	P	F	D	G	T	M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	P	A	I	H	F	S	S
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		P	E	.	.	.	.	.	N	V	Y	G	F	S	K	L	C	M	D	E	F	V	L	S	H	S	N	D	N	V	Q	V	G	L	R	Y
Template Known Secondary structure			S	.	.	.	.	.	S																T	T	T	T	S
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		157	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions