Job Description A0PJE2 Confidence 99.95% Date Wed May 9 17:33:15 BST 2012 Rank 110 Aligned Residues 230 % Identity 20% Template c3pgxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:carveol dehydrogenase; PDBTitle: crystal structure of a putative carveol dehydrogenase from2 mycobacterium paratuberculosis bound to nicotinamide adenine3 dinucleotide Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	Q	G	R	V	A	F	I	T	G	A	A	R	G	Q	G	R	S	H	A	V	R	L	A	A	E	G	A	D	I	I	A	C	D	I	C	A	P	V	S	A	S	V	T	Y	A	P	A	S	P	E	D	L	D	E	T	A	R	L	V	E	D	Q	G	R	K	A	L	T	R	V	L	D	V	R	D	D	A	A
Template Known Secondary structure		T	T	T	T							S	T	T	S													T	T										S				T	T			S																	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		Q	I	W	K	F	V	E	N	F	K	Q	E	H	K	L	H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	.	.	.	L	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q
Query Conservation																																																											.	.	.
Alig confidence																																																											.	.	.
Template Conservation
Template Sequence		L	R	E	L	V	A	D	G	M	E	Q	F	G	R	L	D	V	V	V	A	N	A	G	V	L	S	W	G	R	V	W	E	L	T	D	E	Q	W	D	T	V	I	G	V	N	L	T	G	T	W	R	T	L	R	A	T	V	P	A	M	I	E	A	G	N	G	G	S	I	V	V	V	S	S	S	A	G	L	K	A
Template Known Secondary structure														S															B		G	G	G														T																			S										G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.															.	.
Predicted Secondary structure																																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	N	T	N	D	L	Q	S	E	R	T	P	F	D	G	T	M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	.	.	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P	G	V	R	Q	A	M	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H
Query Conservation																																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	G	H	Y	S	A	S	K	H	G	L	T	A	L	T	N	T	L	A	I	E	L	G	E	Y	G	I	R	V	N	S	I	H	P	Y	S	V	E	T	P	M	I	E	P	E	A	M	M	E	I	F	A	R	H	P	S	F	V	H	S	F	P	P	M
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B																						G	G	G	T										S	B		S	G	G	G		T											G	G	G	G	G	G	S			B
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.														170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	G	D	R	L	R	S	E	A	Q	G	A	D	T	M	L	W	L	A	L	S	S	A	A	A	A	Q	P	S	G	R	F	F	Q
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		P	V	Q	P	N	G	F	M	T	A	D	E	V	A	D	V	V	A	W	L	A	.	.	G	D	G	S	G	T	L	T	G	T	Q	I	P
Template Known Secondary structure		T	T	B		S	S		B														.	.	S	G	G	G	T	T		S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions