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Job DescriptionA0PJE2
Confidence99.97%DateWed May 9 17:33:15 BST 2012
Rank55Aligned Residues242
% Identity16%Templatec3ijrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  SACKDFVPHDLEVQIPGRVFLVTGGNSGIGKATALEIAKRGGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDP
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Template Sequence  LPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQ
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TT



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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   104.....110...... ...120.........130.........140.........150.........160.........170.........180..
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Query Sequence  KQIWKFVENFKQE. HKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQK
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Template Sequence  HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN
Template Known Secondary structure  S










SSGGG

TTT

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T

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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   183......190.........200.........210......... 220.........230.........240.........250. ...
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Query Sequence  LNTNDLQSERTPFDGTMVYAQNKRQQVVLTERWAQGH. . PAIHFSSMHPGWADTPGVRQAMPGFHARFGDR. . . . . . LRS
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Template Sequence  E. . . . . . . . . . . . . TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPXQRPGQ
Template Known Secondary structure  T.............T
GGGT

SB
STTTTTTS
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B
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   188 .190.........200.........210.........220.........230.........240.........250....
 
   255....260.........270.........280
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Query Sequence  EAQGADTMLWLALSSAAAAQPSGRFF
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Template Sequence  PYELAPAYVYLA. . SSDSSYVTGQXI
Template Known Secondary structure  GGGT..SGGGTT

S
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   255....260...... ...270........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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