Job Description A0PJE2 Confidence 99.93% Date Wed May 9 17:33:15 BST 2012 Rank 160 Aligned Residues 194 % Identity 13% Template c3h7aC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of short-chain dehydrogenase from2 rhodopseudomonas palustris Resolution 1.87 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F	K	Q	E	H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	A	T	V	A	V	I	G	A	G	D	Y	I	G	A	E	I	A	K	K	F	A	A	E	G	F	T	V	F	A	G	R	R	N	G	E	K	L	A	P	L	V	A	E	I	E	A	A	G	G	R	I	V	A	R	S	L	D	A	R	N	E	D	E	V	T	A	F	L	N	A	A	D	A	H	A	P	L	E
Template Known Secondary structure												S	S													T	T								S	S	G	G	G	G										T	T										T	T																S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E	R	T	P	F	D	G	T
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	I	F	N	V	G	A	N	V	N	F	P	I	L	E	T	T	D	R	V	F	R	K	V	W	E	M	A	C	W	A	G	F	V	S	G	R	E	S	A	R	L	M	L	A	H	G	Q	G	K	I	F	F	T	G	A	T	A	S	L	R	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F
Template Known Secondary structure															G	G	G														T																	T	T										G	G	G	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.														.	150
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	.	.	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P	G	V	R	Q	A	M	P	G	F	H
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		A	A	F	A	S	A	K	F	G	L	R	A	V	A	Q	S	M	A	R	E	L	M	P	K	N	I	H	V	A	H	L	I	I	D	M	P	P	A	A	V	A	G	A	Y	W	Q	L	Y	Q
Template Known Secondary structure																							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions