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Job DescriptionA0PJE2
Confidence99.96%DateWed May 9 17:33:15 BST 2012
Rank80Aligned Residues231
% Identity21%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  QIPGRVFLVTGGNSGIGKATALEIAKRGGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQE
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Template Sequence  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG
Template Known Secondary structure  TTTT
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SSTT
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TT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   117..120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  . HKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSERTPF
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Template Sequence  ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP. . . . . . . . . . . .
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GGG

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   84.....90.........100.........110.........120.........130.........140.........150.
 
   196...200.........210......... 220.........230.........240.........250.........260.........270...
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Query Sequence  DGTMVYAQNKRQQVVLTERWAQGH. . PAIHFSSMHPGWADTPGVRQAMPGFHARFGDRLRSEAQGADTMLWLALSSAAAA
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Template Sequence  . GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDEQQTAL. . KTQIPLGRLGSPEDIAHAVAFLA. . SPQAG
Template Known Secondary structure  .T
GGGT

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   152.......160.........170.........180.........190........ .200.........210.........220. .....
 
   274.....280....
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Query Sequence  QPSGRFFQDRK
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Template Sequence  YITGTTLHVNG
Template Known Secondary structure  T

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   234.....240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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