Job Description A0PJE2 Confidence 99.96% Date Wed May 9 17:33:15 BST 2012 Rank 66 Aligned Residues 215 % Identity 21% Template c3f5sA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of putatitve short chain dehydrogenase from shigella2 flexneri 2a str. 301 Resolution 1.36 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F	K	Q	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	D	R	I	I	L	V	T	G	A	S	D	G	I	G	R	E	A	A	M	T	Y	A	R	Y	G	A	T	V	I	L	L	G	R	N	E	E	K	L	R	Q	V	A	S	H	I	N	E	E	T	G	R	Q	P	Q	W	F	I	L	D	L	L	T	C	T	S	E	N	C	Q	Q	L	A	Q	R	I	V	V	N
Template Known Secondary structure		T	T	T						T	T	T	T	S													T	T								S																	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		K	L	H	V	L	I	N	N	A	G	C	M	.	.	.	.	.	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E	R
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	R	L	D	G	V	L	H	N	A	G	L	L	G	D	V	C	P	M	S	E	Q	N	P	Q	V	W	Q	D	V	M	Q	I	N	V	N	A	T	F	M	L	T	Q	A	L	L	P	L	L	L	K	S	D	A	G	S	L	V	F	T	S	S	S	V	G	R	Q	G	R	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S			S													S		T	T	T														T																T	S	S	S									G	G	G	T	S			T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		T	P	F	D	G	T	M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	.	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P	G	V	R	Q	A	M	P	G	F	H	A	R	F	G	D	R	L	R	S	E	A	Q	G	A	D	T	M	L	W	L	A	L	S	S	A	A
Query Conservation																													.
Alig confidence		.	.	.	.																								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		.	.	.	.	N	W	G	A	Y	A	A	S	K	F	A	T	E	G	M	M	Q	V	L	A	D	E	Y	Q	Q	R	L	R	V	N	C	I	N	P	G	G	T	R	T	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	K	T	P	A	D	I	M	P	L	Y	L	W	L	M	.	.	G	D	D
Template Known Secondary structure		.	.	.	.	T																						T	T	T	T										S	B				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	B		G	G	G	G									.	.	S	G	G
Template Predicted Secondary structure		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
						159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.															200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.
		272	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	P	S	G	R	F	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	R	K	T	G	M	T	F	D
Template Known Secondary structure		G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions