Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJE2
Confidence99.34%DateWed May 9 17:33:15 BST 2012
Rank222Aligned Residues194
% Identity15%Templatec3ay3C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of glucuronic acid dehydrogeanse from2 chromohalobacter salexigens
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  RVFLVTGGNSGIGKATALEIAKRGGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQEHKLH
Query Conservation 












 
 
  

  

 


  
                                                
Alig confidence 





































...........






















........
Template Conservation 









 

  
   
   
  
    
      ...........         

 
          ........
Template Sequence  NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA. . . . . . . . . . . EAHEEIVACDLADAQAVHDLVKD. . . . . . . .
Template Known Secondary structure  TTTSGGGGGGG

SS




...........
TT



TT
TT........
Template Predicted Secondary structure 














...........










........
Template SS confidence 















































































   3......10.........20.........30.........40 .........50.........60...
 
   121........130.........140.........150.........160.........170.........180.........190.........200
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  VLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSERTPFDGTMV
Query Conservation                                                        
                         
Alig confidence  .........






































































Template Conservation  .........                                          
  

              
         
Template Sequence  . . . . . . . . . CDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSL
Template Known Secondary structure  .........
S

S

S


TTT

GGGSTTSBTTS
TTS




S
Template Predicted Secondary structure  .........





































Template SS confidence 















































































   64.....70.........80.........90.........100.........110.........120.........130....
 
   201........210.........220.........230.........240.........250.........260.........270
Predicted Secondary structure 

















Query SS confidence 





































































Query Sequence  YAQNKRQQVVLTERWAQGHPAIHFSSMHPGWADTPGVRQAMPGFHARFGDRLRSEAQGADTMLWLALSSA
Query Conservation 
  

         
      
 
  
 

 
 
 
                 
 
 

      
    
Alig confidence 


















.














.......



























Template Conservation 
  

   
          .

    

   
 
 .......          
   
 
      
    
Template Sequence  YGLSKCFGEDLASLYYHKF. DIETLNIRIGSCFPK. . . . . . . PKDARMMATWLSVDDFMRLMKRAFVAPK
Template Known Secondary structure  TT.



B
SSS.......

STTB


S
Template Predicted Secondary structure  .








.......












Template SS confidence 





































































   135....140.........150... ......160........ .170.........180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions