Job Description A0PJE2 Confidence 99.38% Date Wed May 9 17:33:15 BST 2012 Rank 218 Aligned Residues 212 % Identity 13% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																													.									.	.	.
Query SS confidence																													.									.	.	.
Query Sequence		P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	.	T	V	H	L	V	C	R	D	.	.	.	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F	K
Query Conservation																													.									.	.	.
Alig confidence																													.									.	.	.
Template Conservation
Template Sequence		P	H	K	S	Y	V	I	T	G	G	L	G	G	F	G	L	Q	L	A	Q	W	L	R	L	R	G	A	Q	K	L	V	L	T	S	R	S	G	I	R	T	G	Y	Q	A	R	Q	V	R	E	W	R	R	Q	G	V	Q	V	L	V	S	T	S	N	A	S	S	L	D	G	A	R	S	L	I	T	E	A	T	Q	L
Template Known Secondary structure		T	T							S	T	T	S													T	T									S	S				S													T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		1883	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	H	K	L	H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E	R	T	P
Query Conservation
Alig confidence																																																.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	V	G	G	V	F	N	L	A	M	V	L	R	D	A	V	L	E	N	Q	T	P	E	F	F	Q	D	V	S	K	P	K	Y	S	G	T	A	N	L	D	R	V	T	R	E	.	.	A	C	P	E	L	D	Y	F	V	I	F	S	S	V	S	C	G	R	G	N	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																	S	T	T			T	T						T	T	T	T														.	.			T	T														T	T		T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1963	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.			.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		F	D	G	T	M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	P	A	I	H	F	S	S	M	H	P	G	W	A	.	D	T	P	G	V	R	Q	A	M	P	G	F	H	A	R	F	G	D	R	L	R	S	E	A	Q	G	A	D	T	M	L	W	L	A	L	S	S	A
Query Conservation																																								.
Alig confidence		.	.																							.	.													.										.	.	.
Template Conservation		.	.																							.	.																							.	.	.
Template Sequence		.	.	G	Q	A	N	Y	G	F	A	N	S	A	M	E	R	I	C	E	K	R	R	H	D	.	.	G	L	P	G	L	A	V	Q	W	G	A	I	G	D	V	G	V	V	L	E	N	D	.	.	.	T	V	I	G	G	T	L	P	Q	R	I	A	S	C	L	E	V	L	D	L	F	L	S	Q	P	H
Template Known Secondary structure		.	.	T																					T	.	.	T	S										B		T	T	S	T	T	T				.	.	.			T	T	S				B														T		S
Template Predicted Secondary structure		.	.																							.	.																							.	.	.
Template SS confidence
				2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.			.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.				.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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