Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJE2
Confidence98.59%DateWed May 9 17:33:15 BST 2012
Rank273Aligned Residues181
% Identity14%Templatec2hunB_
PDB info PDB header:lyaseChain: B: PDB Molecule:336aa long hypothetical dtdp-glucose 4,6-dehydratase; PDBTitle: crystal structure of hypothetical protein ph0414 from pyrococcus2 horikoshii ot3
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  IPGRVFLVTGGNSGIGKATALEIAKRGGTVHLVCRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQEH
Query Conservation 
 













 
 
  

  

 


  
                                             
Alig confidence 















































































Template Conservation 
  












  

  

  
  
 
                       
     
                  
Template Sequence  MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVV
Template Known Secondary structure 
TT
TTTS
TT



TT

GGGGTTTTT
TT

TT

S
Template Predicted Secondary structure 









































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  KLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSERTPFDG
Query Conservation                                                           
                      
Alig confidence 


.............































































Template Conservation    
.............                                                                
Template Sequence  HLA. . . . . . . . . . . . . AESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMP
Template Known Secondary structure 

.............




T
TTSGGGG


SSS
B
TTS



Template Predicted Secondary structure  .............

















































Template SS confidence 















































































   81.. ......90.........100.........110.........120.........130.........140.......
 
   198.200.........210.........220.........230.
Predicted Secondary structure 






Query SS confidence 

































Query Sequence  TMVYAQNKRQQVVLTERWAQGHPAIHFSSMHPGW
Query Conservation     
  

         
      
 
  
 

 
Alig confidence 

































Template Conservation                                    
Template Sequence  SSPYSATKAASDMLVLGWTRTYNLNASITRCTNN
Template Known Secondary structure 
STT

Template Predicted Secondary structure 








Template SS confidence 

































   148.150.........160.........170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions