 |
| Job Description | A0PJE2 | | Confidence | 95.33% | Date | Wed May 9 17:33:15 BST 2012 |
| Rank | 450 | Aligned Residues | 40 |
| % Identity | 15% | Template | c2g1uA_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:hypothetical protein tm1088a; |
PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution
|
| Resolution | 1.50 Å |
|
|   |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | G | R | V | F | L | V | T | G | G | N | S | G | I | G | K | A | T | A | L | E | I | A | K | R | G | G | T | V | H | L | V | C | R | D | Q | A | P | A | E | D |
| Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |
|
|
|   |
|   | . |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
K | S | K | Y | I | V | I | F | G | C | . |
G | R | L | G | S | L | I | A | N | L | A | S | S | S | G | H | S | V | V | V | V | D | K | N | E | Y | A | F | H | R |
| Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
| G | G | G | G | G | G |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
6 | . | . | . | 10 | . | . | . | . | . | |
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|