Job Description A0PJE2 Confidence 99.97% Date Wed May 9 17:33:15 BST 2012 Rank 46 Aligned Residues 271 % Identity 16% Template c2et6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:(3r)-hydroxyacyl-coa dehydrogenase; PDBTitle: (3r)-hydroxyacyl-coa dehydrogenase domain of candida tropicalis2 peroxisomal multifunctional enzyme type 2 Resolution 2.22 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	Y	T	K	S	G	Y	E	S	A	C	K	D	F	V	P	H	D	L	E	V	Q	I	P	G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F
Query Conservation
Alig confidence																																																															.	.	.
Template Conservation																																																															.	.	.
Template Sequence		Y	A	T	L	T	N	E	A	R	K	L	P	A	N	D	A	S	G	A	P	T	V	S	L	K	D	K	V	V	L	I	T	G	A	G	A	G	L	G	K	E	Y	A	K	W	F	A	K	Y	G	A	K	V	V	V	N	D	F	K	D	A	.	.	.	T	K	T	V	D	E	I	K	A	A	G	G	E	A	W	P
Template Known Secondary structure										T	T	S						T	T							T	T						S	S		S	S													T	T								S	S			.	.	.										T	T
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F	K	Q	E	H	K	L	H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	E	K	E	H	D	P	R	V	I	T	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	H	D	V	A	K	D	S	E	A	I	I	K	N	V	I	D	K	Y	G	T	I	D	I	L	V	N	N	A	G	I	L	R	D	R	S	F	A	K	M	S	K	Q	E	W	D	S	V	Q	Q	V	H	L	I	G	T	F	N	L	S	R	L	A	W	P	Y	F	V	E	K	Q	F	G	R	I	I	N	I	T
Template Known Secondary structure																						S															B		T	T	T														T																	T	T
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E	R	T	P	F	D	G	T	M	V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	.	.	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P	G	V	R	Q	A	M	P	G	F	H	A	R	F	G	D	R	L
Query Conservation																																															.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.												.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																																					.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	S	G	I	Y	G	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	A	N	Y	S	S	S	K	A	G	I	L	G	L	S	K	T	M	A	I	E	G	A	K	N	N	I	K	V	N	I	V	A	P	H	.	A	E	T	A	M	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure							S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B																						G	G	G	T										.								.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																																					.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		454	.	.	.	.	.	460	.	.														.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.		.	500	.	.	.	.	.														.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.								.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.
Query Sequence		R	S	E	A	Q	G	A	D	T	M	L	W	L	A	L	S	S	A	A	A	A	Q	P	S	G	R	F	F	Q	D	R	K	.	.	.	.	.	.	.	P	V	S	T	H	L	P	L	A	T	A	S	S	S	P	A	E	E	E	K	L	I	E	I	L	E	Q	L	A	Q	T	F	K
Query Conservation																																		.	.	.	.	.	.	.
Alig confidence																.						.												.	.	.	.	.	.	.
Template Conservation																.						.
Template Sequence		Y	H	A	D	Q	V	A	P	L	L	V	Y	L	G	.	T	D	D	V	P	.	V	T	G	E	T	F	E	I	G	G	G	W	I	G	N	T	R	W	Q	R	A	K	G	A	V	S	H	D	E	H	T	T	V	E	F	I	K	E	H	L	N	E	I	T	D	F	T	T	D	T	E
Template Known Secondary structure		S		G	G	G	T							T	T	.	S	T	T			.			S							T	T																	S	S	S														T			S	S	S		B
Template Predicted Secondary structure																.						.
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.		530	.	.	.	.		.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions