Job Description A0PJE2 Confidence 99.90% Date Wed May 9 17:33:15 BST 2012 Rank 188 Aligned Residues 221 % Identity 20% Template c2ekqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-deoxy-d-gluconate 3-dehydrogenase; PDBTitle: structure of tt0495 protein from thermus thermophilus Resolution 1.80 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F	K	Q	E	H	K	L
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.
Template Sequence		E	R	K	A	L	V	T	G	G	S	R	G	I	G	R	A	I	A	E	A	L	V	A	R	G	Y	R	V	A	I	A	S	R	N	P	E	E	A	A	Q	S	L	G	A	.	.	.	.	.	.	.	.	V	P	L	P	T	D	L	E	K	D	D	P	K	G	L	V	K	R	A	L	E	A	L	G	G	L	H	V
Template Known Secondary structure									T	T	T	S													T	T								S	S									T		.	.	.	.	.	.	.	.							T	T	T	S														T	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E	R	T	P	F	D	G	T	M
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	H	A	A	A	V	N	V	R	K	P	A	L	E	L	S	Y	E	E	W	R	R	V	L	Y	L	H	L	D	V	A	F	L	L	A	Q	A	A	A	P	H	M	A	E	A	G	W	G	R	V	L	F	I	G	S	V	T	T	F	T	A	G	G	P	V	.	.	.	.	.	.	.	.	.	.	.	P	I	P
Template Known Secondary structure														T	T	T														T																		T										G	G	G	T	S			T	T	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.												140	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.								.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																						.	.																							.	.	.	.	.	.	.
Query SS confidence																						.	.																							.	.	.	.	.	.	.
Query Sequence		V	Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	.	.	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P	G	V	R	Q	A	M	.	.	.	.	.	.	.	P	G	F	H	A	R	F	G	D	R	L	R	S	E	A	Q	G	A	D	T	M	L	W	L	A	L	S	S	A
Query Conservation																						.	.																							.	.	.	.	.	.	.
Alig confidence																						.	.																							.	.	.	.	.	.	.																										.	.
Template Conservation																																																																														.	.
Template Sequence		A	Y	T	T	A	K	T	A	L	L	G	L	T	R	A	L	A	K	E	W	A	R	L	G	I	R	V	N	L	L	C	P	G	Y	V	E	T	E	F	T	L	P	L	R	Q	N	P	E	L	Y	E	P	I	T	A	R	I	P	M	G	R	W	A	R	P	E	E	I	A	R	V	A	A	V	L	C	.	.	G	D
Template Known Secondary structure																						G	G	G	T										S	B		S	G	G	G					T										T	T		T	T	S	S		B													T	.	.	S	G
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220
		271	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	Q	P	S	G	R	F	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	E	Y	L	T	G	Q	A	V	A
Template Known Secondary structure		G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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