Job Description A0PJE2 Confidence 98.82% Date Wed May 9 17:33:15 BST 2012 Rank 249 Aligned Residues 185 % Identity 11% Template c1n7gB_ PDB info PDB header:lyase Chain: B: PDB Molecule:gdp-d-mannose-4,6-dehydratase; PDBTitle: crystal structure of the gdp-mannose 4,6-dehydratase2 ternary complex with nadph and gdp-rhamnose. Resolution 2.20 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	F	L	V	T	G	G	N	S	G	I	G	K	A	T	A	L	E	I	A	K	R	G	G	T	V	H	L	V	C	R	D	Q	A	P	A	E	D	A	R	G	E	I	I	R	E	S	G	N	Q	N	I	F	L	H	I	V	D	L	S	D	P	K	Q	I	W	K	F	V	E	N	F	K	Q	E	H	K	L	H
Query Conservation
Alig confidence																																																																								.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		K	I	A	L	I	T	G	I	T	G	Q	D	G	S	Y	L	T	E	F	L	L	G	K	G	Y	E	V	H	G	L	I	R	R	S	S	N	F	N	T	Q	R	I	N	H	I	Y	I	D	K	A	L	M	K	L	H	Y	A	D	L	T	D	A	S	S	L	R	R	W	I	D	.	.	.	.	.	V	I	K	P	D
Template Known Secondary structure								T	T	T	S												T	T	T											S	S				T	T	T									S								T	T											.	.	.	.	.					S
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	N	N	A	G	C	M	V	N	K	R	E	L	T	E	D	G	L	E	K	N	F	A	A	N	T	L	G	V	Y	I	L	T	T	G	L	I	P	V	L	E	K	E	H	D	P	R	V	I	T	V	S	S	G	G	M	L	V	Q	K	L	N	T	N	D	L	Q	S	E	R	T	P	F	D	G	T	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	Y	N	L	A	A	Q	S	H	V	A	V	S	F	E	I	P	D	Y	T	A	D	V	V	A	T	G	A	L	R	L	L	E	A	V	R	S	H	T	I	D	S	G	R	T	V	K	Y	Y	Q	A	G	S	S	E	M	F	G	S	T	P	P	P	Q	S	E	T	T	P	F	H	P	R	S	P	Y	A	A	S
Template Known Secondary structure																		S									T																													G	G	G	G	T	T	S		S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	Q	N	K	R	Q	Q	V	V	L	T	E	R	W	A	Q	G	H	P	A	I	H	F	S	S	M	H	P	G	W	A	D	T	P
Query Conservation
Alig confidence																.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		K	C	A	A	H	W	Y	T	V	N	Y	R	E	A	.	.	.	.	.	Y	G	L	F	A	C	N	G	I	L	F	N	H	E	S	P
Template Known Secondary structure																.	.	.	.	.																T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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