Job Description A1A580 Confidence 5.50% Date Sat Jun 16 10:16:46 BST 2012 Rank 9 Aligned Residues 45 % Identity 31% Template c3towA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:multivesicular body subunit 12b; PDBTitle: crystal structure of the mabp domain of mvb12b of human escrt-i2 complex Resolution 1.34 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		G	N	F	S	S	H	S	C	E	G	Y	L	C	Y	S	G	Y	S	R	G	G	S	S	Y	P	S	N	L	V	Y	S	T	E	P	L	I	.	.	.	.	S	Q	H	L	P	A	G	F	L	S	L	Q
Query Conservation																																						.	.	.	.
Alig confidence																	.	.	.																			.	.	.	.
Template Conservation																	.	.	.
Template Sequence		D	G	L	F	K	S	K	V	T	R	Y	L	C	F	T	.	.	.	R	S	F	S	K	E	N	S	H	L	G	N	V	L	V	D	M	K	L	I	D	I	K	D	T	L	P	V	G	F	I	P	I	Q
Template Known Secondary structure				T	T	S											.	.	.					S	T	T	G	G	G												T	T	S				T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions