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Job DescriptionP08631
Confidence100.00%DateThu Apr 26 09:51:20 BST 2012
Rank43Aligned Residues234
% Identity26%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280... ......290.........300.........310.........320.... .....330.........340.....
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Query Sequence  LGAGQFGEVWMATYNK. HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV. TKEPIYIITEFMAKGSLLDFL
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Template Sequence  RKLGSYGEVLLCKEKNGHSEKAIKVIK. . KKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI
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TTT

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   61........70.........80....... ..90.........100.........110.........120.........130........
 
   346...350.........360.........370.........380......... 390.........400.........410.........420..
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Query Sequence  KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV. . . SASLVCKIADFGLARVIEDNEYTAREGAKFPIK
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Template Sequence  INRH. . KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR. . LGTAY
Template Known Secondary structure  S..


TT
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   157..160 .........170.........180.........190.........200.........210.........220....... ..230..
 
   423......430.........440.........450.........460.........470.........480 .........490.........
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Query Sequence  WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE. . . NCPEELYNIMMRCWKNRPE
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Template Sequence  YIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYN
Template Known Secondary structure  T

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   233......240. ........250.........260. ........270.........280.........290.........300.........310
 
   500.........
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Query Sequence  ERPTFEYIQS
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Template Sequence  KRCTAEEALN
Template Known Secondary structure  TS

T
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   311........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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