Job Description P08631 Confidence 100.00% Date Thu Apr 26 09:51:20 BST 2012 Rank 47 Aligned Residues 280 % Identity 37% Template c3l9pA_ PDB info PDB header:transferase Chain: A: PDB Molecule:anaplastic lymphoma kinase; PDBTitle: crystal structure of the anaplastic lymphoma kinase catalytic domain Resolution 1.80 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																							.																		.	.
Query SS confidence																																							.																		.	.
Query Sequence		Q	K	P	W	E	K	D	A	W	E	I	P	R	E	S	L	K	L	E	K	K	L	G	A	G	Q	F	G	E	V	W	M	A	T	Y	N	K	.	H	T	K	V	A	V	K	T	M	K	P	G	S	M	S	V	E	.	.	A	F	L	A	E	A	N	V	M	K	T	L	Q	H	D	K	L	V	K	L	H	A	V
Query Conservation																																							.																		.	.
Alig confidence																																							.																		.	.
Template Conservation
Template Sequence		K	T	S	S	I	S	D	L	K	E	V	P	R	K	N	I	T	L	I	R	G	L	G	H	G	A	F	G	E	V	Y	E	G	Q	V	S	G	S	P	L	Q	V	A	V	K	T	L	P	E	V	C	S	E	Q	D	E	L	D	F	L	M	E	A	L	I	I	S	K	F	N	H	Q	N	I	V	R	C	I	G	V
Template Known Secondary structure						G	G	G	S		B			G	G	G											S	S	S																					S	S																						T	T	B
Template Predicted Secondary structure
Template SS confidence
		1101	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180
		324		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.						.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.				.
Predicted Secondary structure			.																								.	.	.	.	.																																															.	.	.
Query SS confidence			.																								.	.	.	.	.																																															.	.	.
Query Sequence		V	.	T	K	E	P	I	Y	I	I	T	E	F	M	A	K	G	S	L	L	D	F	L	K	S	.	.	.	.	.	D	E	G	S	K	Q	P	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	F	I	E	Q	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	A	S	L	.	.	.	V
Query Conservation			.																								.	.	.	.	.																																															.	.	.
Alig confidence			.																								.	.	.	.	.																																															.	.	.
Template Conservation
Template Sequence		S	L	Q	S	L	P	R	F	I	L	L	E	L	M	A	G	G	D	L	K	S	F	L	R	E	T	R	P	R	P	S	Q	P	S	S	L	A	M	L	D	L	L	H	V	A	R	D	I	A	C	G	C	Q	Y	L	E	E	N	H	F	I	H	R	D	I	A	A	R	N	C	L	L	T	C	P	G	P	G	R	V
Template Known Secondary structure				S	S	S	S									T	T											S			S	S	S																										T	T				S				G	G	G				S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1186	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		C	K	I	A	D	F	G	L	A	R	V	.	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	S	F	T	I	K	S	D	V	W	S	F	G	I	L	L	M	E	I	V	T	Y	G	R	I	P	Y	P	G	M	S	N	P	E	V	I	R	A	L	E	R	G
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		A	K	I	G	D	F	G	M	A	R	D	I	Y	R	A	G	Y	Y	R	K	G	G	C	A	M	L	P	V	K	W	M	P	P	E	A	F	M	E	G	I	F	T	S	K	T	D	T	W	S	F	G	V	L	L	W	E	I	F	S	L	G	Y	M	P	Y	P	S	K	S	N	Q	E	V	L	E	F	V	T	S	G
Template Known Secondary structure																	S	S		T	T			G	G	G	S		G	G	G																													T	T	S			S	S	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		1266	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	M	P	R	P	E	N	C	P	E	E	L	Y	N	I	M	M	R	C	W	K	N	R	P	E	E	R	P	T	F	E	Y	I	Q	S	V	L	D	D	F	Y	T	A	T	E	S	Q	Y	Q	Q	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	M	D	P	P	K	N	C	P	G	P	V	Y	R	I	M	T	Q	C	W	Q	H	Q	P	E	D	R	P	N	F	A	I	I	L	E	R	I	E	Y	C	T	Q	D	P	D	V	I	N	T	A	L	P
Template Known Secondary structure								T	T													T		S	S	G	G	G	S																					T
Template Predicted Secondary structure
Template SS confidence
		1346	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions