Job Description P08631 Confidence 100.00% Date Thu Apr 26 09:51:20 BST 2012 Rank 159 Aligned Residues 257 % Identity 24% Template c3h4jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:snf1-like protein kinase ssp2; PDBTitle: crystal structure of pombe ampk kdaid fragment Resolution 2.80 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																									.											.	.	.	.																																.
Query SS confidence																									.											.	.	.	.																																.
Query Sequence		S	L	K	L	E	K	K	L	G	A	G	Q	F	G	E	V	W	M	A	T	Y	N	K	.	H	T	K	V	A	V	K	T	M	K	.	.	.	.	P	G	S	M	S	V	E	A	F	L	A	E	A	N	V	M	K	T	L	Q	H	D	K	L	V	K	L	H	A	V	V	.	T	K	E	P	I	Y	I	I	T	E
Query Conservation																									.											.	.	.	.																																.
Alig confidence																									.											.	.	.	.																																.
Template Conservation
Template Sequence		P	Y	I	I	R	E	T	L	G	E	G	S	F	G	K	V	K	L	A	T	H	Y	K	T	Q	Q	K	V	A	L	K	F	I	S	R	Q	L	L	K	K	S	D	M	H	M	R	V	E	R	E	I	S	Y	L	K	L	L	R	H	P	H	I	I	K	L	Y	D	V	I	T	T	P	T	D	I	V	M	V	I	E
Template Known Secondary structure		T											T	T									T	T	T																	T	T		S											T	T				T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	A	K	G	S	L	L	D	F	L	K	S	D	E	G	S	K	Q	P	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	F	I	E	Q	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	A	S	L	V	C	K	I	A	D	F	G	L	A	R	V	I	E	D	N	E	Y	T	A	R
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		Y	A	G	G	E	L	F	D	Y	I	V	E	K	K	R	.	.	.	M	T	E	D	E	G	R	R	F	F	Q	Q	I	I	C	A	I	E	Y	C	H	R	H	K	I	V	H	R	D	L	K	P	E	N	L	L	L	D	D	N	L	N	V	K	I	A	D	F	G	L	S	N	I	M	T	D	G	N	F	L	K	T
Template Known Secondary structure																S	.	.	.																								T							S	T	T	T					T	T								S	S		T	B	T	T	T	T	S	B	T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	S	F	T	I	K	S	D	V	W	S	F	G	I	L	L	M	E	I	V	T	Y	G	R	I	P	Y	P	G	M	S	N	P	E	V	I	R	A	L	E	R	G	Y	R	M	P	R	P	E	N	C	P	E	E	L	Y	N	I	M	M	R	C	W
Query Conservation
Alig confidence									.																															.																					.
Template Conservation									.																															.																					.
Template Sequence		S	C	G	S	P	N	Y	.	A	A	P	E	V	I	N	G	K	L	Y	A	G	P	E	V	D	V	W	S	C	G	I	V	L	Y	V	M	L	V	.	G	R	L	P	F	D	D	E	F	I	P	N	L	F	K	K	V	N	S	C	.	V	Y	V	M	P	D	F	L	S	P	G	A	Q	S	L	I	R	R	M	I
Template Known Secondary structure			T	T	S	T	T	T	.	S		G	G	G	S			S	G	G	G																			.	S	S		S	S	B		S	S	S	T	T		B					S	S	.						T	T	S										T	T	S
Template Predicted Secondary structure									.																															.																					.
Template SS confidence
		190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	R	P	E	E	R	P	T	F	E	Y	I	Q	S	V	L	D	D	F	Y	T	A	T	E	S	Q	Y	Q	Q	Q
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		V	A	D	P	M	Q	R	I	T	I	Q	E	I	R	R	.	.	D	P	W	F	N	V	N	L	P	D	Y	L	R	P
Template Known Secondary structure			S	S	G	G	G	S							T	T	.	.						T	T			G	G	G	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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