Job Description P08631 Confidence 100.00% Date Thu Apr 26 09:51:20 BST 2012 Rank 209 Aligned Residues 229 % Identity 25% Template c3famA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1 Resolution 2.20 Å

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		265	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure								.														.																																										.
Query SS confidence								.														.																																										.
Query Sequence		E	K	K	L	G	A	.	G	Q	F	G	E	V	W	M	A	T	Y	N	K	.	H	T	K	V	A	V	K	T	M	K	P	G	S	M	S	V	E	A	F	L	A	E	A	N	V	M	K	T	L	Q	H	D	K	L	V	K	L	H	A	V	V	.	T	K	E	P	I	Y	I	I	T	E	F	M	A	K	G	S	L
Query Conservation								.														.																																										.
Alig confidence								.														.															.																											.															.
Template Conservation																																					.																																										.
Template Sequence		G	A	H	I	G	N	Y	Q	I	V	K	K	V	K	L	A	Y	H	T	T	T	G	Q	K	V	A	L	K	I	I	N	K	K	V	M	.	Q	G	R	I	E	R	E	I	S	Y	L	R	L	L	R	H	P	H	I	I	K	L	Y	D	V	I	K	S	K	D	E	I	I	M	V	I	E	Y	A	G	N	.	E	L
Template Known Secondary structure				B				B		S										T	T	T											S				.																	T	T	B										S	S												.
Template Predicted Secondary structure																																					.																																										.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	F	L	K	S	D	E	G	S	K	Q	P	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	F	I	E	Q	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	A	S	L	V	C	K	I	A	D	F	G	L	A	R	V	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I
Query Conservation
Alig confidence										.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	Y	I	V	Q	R	D	.	.	K	M	S	E	Q	E	A	R	R	F	F	Q	Q	I	I	S	A	V	E	Y	C	H	R	H	K	I	V	H	R	D	L	K	P	E	N	L	L	L	D	E	H	L	N	V	K	I	A	D	F	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	S	S	.	.	S																							T	T							S	G	G	G					T	T	S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	T	A	P	E	A	I	N	F	G	S	F	T	I	K	S	D	V	W	S	F	G	I	L	L	M	E	I	V	T	Y	G	R	I	P	Y	P	G	M	S	N	P	E	V	I	R	A	L	E	R	G	Y	R	M	P	R	P	E	N	C	P	E	E	L	Y	N	I	M	M	R	C	W	K	N	R	P	E	E	R
Query Conservation
Alig confidence		.	.																														.																					.
Template Conservation		.	.																														.																					.
Template Sequence		.	.	S	P	N	Y	A	A	P	E	V	I	S	G	P	E	V	D	V	W	S	C	G	V	I	L	Y	V	M	L	C	.	R	R	L	P	F	D	D	E	S	I	P	V	L	F	K	N	I	S	N	G	.	V	Y	T	L	P	K	F	L	S	P	G	A	A	G	L	I	K	R	M	L	I	V	N	P	L	N	R
Template Known Secondary structure		.	.			T	T									T																	.	S	S		S	S			S	S											T	.						T	T	S												S		S	S	G	G	G	S
Template Predicted Secondary structure		.	.																														.																					.
Template SS confidence
				199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	F	E	Y	I	Q	S	V	L	D	D	F	Y	T	A	T	E	S	Q	Y
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		I	S	I	H	E	I	M	Q	.	.	D	D	W	F	K	V	D	L	P	E	Y
Template Known Secondary structure								T	T	.	.						T	T			G	G
Template Predicted Secondary structure										.	.
Template SS confidence
		295	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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