Job Description P08631 Confidence 100.00% Date Thu Apr 26 09:51:20 BST 2012 Rank 25 Aligned Residues 257 % Identity 43% Template c3dpkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrophage colony-stimulating factor 1 receptor; PDBTitle: cfms tyrosine kinase in complex with a pyridopyrimidinone2 inhibitor Resolution 1.95 Å

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		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																						.	.	.														.	.															.
Query SS confidence																																						.	.	.														.	.															.
Query Sequence		W	E	K	D	A	W	E	I	P	R	E	S	L	K	L	E	K	K	L	G	A	G	Q	F	G	E	V	W	M	A	T	Y	N	K	H	T	.	.	.	K	V	A	V	K	T	M	K	P	G	S	M	S	.	.	V	E	A	F	L	A	E	A	N	V	M	K	T	L	.	Q	H	D	K	L	V	K	L	H	A	V
Query Conservation																																						.	.	.														.	.															.
Alig confidence																																						.	.	.														.	.															.
Template Conservation
Template Sequence		P	Y	N	E	K	W	E	F	P	R	N	N	L	Q	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	F	G	L	G	A	V	L	K	V	A	V	K	M	L	K	S	T	A	H	A	D	E	K	E	A	L	M	S	E	L	K	I	M	S	H	L	G	Q	H	E	N	I	V	N	L	L	G	A
Template Known Secondary structure					G	G	G	B			G	G	G											S	S										S														T	T																							T	T	B
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
		324	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	T	K	E	.	P	I	Y	I	I	T	E	F	M	A	K	G	S	L	L	D	F	L	K	S	D	E	G	S	K	Q	P	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	F	I	E	Q	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	A	S	L	V	C	K	I	A	D	F	G	L
Query Conservation						.
Alig confidence						.																						.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		C	T	H	G	G	P	V	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	Q	.	.	.	.	L	S	S	R	D	L	L	H	F	S	S	Q	V	A	Q	G	M	A	F	L	A	S	K	N	C	I	H	R	D	V	A	A	R	N	V	L	L	T	N	G	H	V	A	K	I	G	D	F	G	L
Template Known Secondary structure				S	S	S	S									T	T											.	.	.	.																							T	T				S			S	G	G	G					G	G	G								T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.					.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470		.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		A	R	V	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	S	F	T	I	K	S	D	V	W	S	F	G	I	L	L	M	E	I	V	T	Y	G	R	I	P	Y	P	G	M	S	N	P	E	V	I	R	A	L	.	E	R	G	Y	R	M	P	R	P	E	N
Query Conservation																																																																						.
Alig confidence																	.	.	.																																																			.
Template Conservation																	.	.	.
Template Sequence		A	R	D	I	M	N	D	S	N	Y	I	V	R	L	P	.	.	.	V	K	W	M	A	P	E	S	I	F	D	C	V	Y	T	V	Q	S	D	V	W	S	Y	G	I	L	L	W	E	I	F	S	L	G	L	N	P	Y	P	G	I	L	V	N	S	K	F	Y	K	L	V	K	D	G	Y	Q	M	A	Q	P	A	F
Template Known Secondary structure		T	S		G	G	G		T	T	S	B			B		.	.	.	G	G	G	S																												T	T	S			S	S	T	T			S	S									T	T							T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		800	.	.	.	.	.	.	.	.	.	810	.	.	.	.				.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	E	E	L	Y	N	I	M	M	R	C	W	K	N	R	P	E	E	R	P	T	F	E	Y	I	Q	S	V	L	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	K	N	I	Y	S	I	M	Q	A	C	W	A	L	E	P	T	H	R	P	T	F	Q	Q	I	C	S	F	L	Q	E
Template Known Secondary structure														T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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