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Job DescriptionP08631
Confidence100.00%DateThu Apr 26 09:51:20 BST 2012
Rank174Aligned Residues243
% Identity21%Templatec2qr8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280...... ...290.........300.........310. ........320.... .....330......
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Query Sequence  ESLKLEKKLGAGQFGEVWMATYNKHTK. VAVKTMKPGSMSVEAFLAEANVMKT. LQHDKLVKLHAVV. TKEPIYIITEFM
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Template Sequence  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS. . . KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM
Template Known Secondary structure  TT
SSTTTTTT...T

TTTSTTB


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   420.........430.........440.........450...... ...460.........470.........480.........490......
 
   337..340.........350.........360.........370.........380.........390... ......400.........410..
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Query Sequence  AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL. . . . VCKIADFGLARVIEDNEYT
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Template Sequence  KGGELLDKILRQK. . FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL
Template Known Secondary structure 
S
BT
T..T

TT
S


GGGSSSS

GGG


TT

B
TTS
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   497..500......... 510.........520.........530.........540.........550.........560.........570....
 
   413......420.........430.........440.........450.........460... ......470........ .480......
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Query Sequence  AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN. . . PEVIRALERGYRMPR. . . PENCPEEL
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Template Sequence  LMTPCYTAN. FVAPEVLERQGYDAACDIWSLGVLLYTMLT. GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA
Template Known Secondary structure  B

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   575....580... ......590.........600.........610... ......620.........630.........640.........650..
 
   487..490.........500.........
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Query Sequence  YNIMMRCWKNRPEERPTFEYIQS
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Template Sequence  KDLVSKMLHVDPHQRLTAALVLR
Template Known Secondary structure  S
SSTTTS

T
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   653......660.........670.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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