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Job DescriptionP08631
Confidence100.00%DateThu Apr 26 09:51:20 BST 2012
Rank75Aligned Residues245
% Identity22%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280... ......290.. .......300.........310.........320.... .....330.....
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Query Sequence  RESLKLEKKLGAGQFGEVWMATYNK. HTKVAVKTM. KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV. TKEPIYIITEF
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Template Sequence  NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB


SS

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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   336...340.........350.........360.........370.........380......... 390.........400.........410..
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Query Sequence  MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV. . . SASLVCKIADFGLARVIEDNEYT
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Template Sequence  CTGGELFERVVHKR. . VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM
Template Known Secondary structure 

SGGGGGTTTS..S

TT



SGGGSSSSTT




TT


TT

B
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   105....110........ .120.........130.........140.........150.........160.........170.........180..
 
   413......420.........430.........440.........450.........460.........470......... 480.........490
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Query Sequence  AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP. . ENCPEELYNIM
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Template Sequence  RTK. . VGTPYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLI
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   183.. ....190.........200 .........210......... 220.........230.........240.........250........
 
   491........500.........
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Query Sequence  MRCWKNRPEERPTFEYIQS
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Template Sequence  RRLLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

TT
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   260.........270........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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