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Job DescriptionP08631
Confidence100.00%DateThu Apr 26 09:51:20 BST 2012
Rank87Aligned Residues246
% Identity26%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.. .......290.........300.........310.........320.... .....330.......
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Query Sequence  ESLKLEKKLGAGQFGEVWMATYN. KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV. TKEPIYIITEFMA
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS
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S



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T
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   7..10.........20.........30.........40...... ...50.........60.........70.........80.....
 
   338.340.........350.........360.........370.........380.........390.........400...... ...410......
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Query Sequence  KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI. EDNEYTAREG
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Template Sequence  GGELFDRIEPDI. . GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK
Template Known Secondary structure  TGGGGSBTTT..B

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SGGG
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TT

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   8990.........100 .........110.........120.........130.........140.........150.........160......
 
   417..420.........430.... .....440.........450.........460.........470 .........480.........490...
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Query Sequence  AKFPIKWTAPEAINFGSF. TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL. . ERGYRMPRPENCPEELYNIMMRC
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Template Sequence  MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI
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GGGS

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   167..170.........180.........190.........200... ......210.........220.........230.........240.....
 
   494.....500.........
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Query Sequence  WKNRPEERPTFEYIQS
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Template Sequence  LVENPSARITIPDIKK
Template Known Secondary structure  S
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   246...250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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