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Job DescriptionP08631
Confidence100.00%DateThu Apr 26 09:51:20 BST 2012
Rank88Aligned Residues246
% Identity22%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280.. .......290.........300 .........310.........320.... .....330...
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Query Sequence  RESLKLEKKLGAGQFGEVWMATYN. KHTKVAVKTMKPGSMSVE. . . AFLAEANVMKTLQHDKLVKLHAVV. TKEPIYIIT
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF
Template Known Secondary structure  TTTTTTTT


SS




TTB


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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   334.....340.........350.........360.........370.........380.........390 .........400.........410
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Query Sequence  EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS. . . ASLVCKIADFGLARVIEDNE
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Template Sequence  DLVTGGELFEDIVARE. . FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE
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S
BTT
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B



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B

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   90.........100..... ....110.........120.........130.........140.........150.........160.......
 
   411........420.........430.........440.........450.........460.........470..... ....480.......
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Query Sequence  YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR. . . MPRPENCPEELY
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Template Sequence  AWHGF. . AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  B


S..
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   169170... ......180.........190.........200........ .210.........220.........230.........240.....
 
   488.490.........500.........
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Query Sequence  NIMMRCWKNRPEERPTFEYIQS
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Template Sequence  SLIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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TT
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   246...250.........260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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