Job Description P08631 Confidence 99.92% Date Thu Apr 26 09:51:20 BST 2012 Rank 288 Aligned Residues 159 % Identity 28% Template c2b3oA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1 Resolution 2.80 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.																					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	I	V	V	A	L	Y	D	Y	E	A	I	H	H	E	D	L	S	F	Q	K	G	D	Q	M	V	V	L	.	.	E	E	S	G	E	W	W	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	L	A	T	R	K	E	G	Y	I	P	S	N	Y	V	A	R	V	D
Query Conservation																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	G	D	Q	V	T	H	I	R	I	Q	N	S	G	D	F	Y	D	L	Y	G	G	E	K	F	A	T	L	T	E	L	V	E	Y	Y	T	Q	Q	Q	G	V	L	Q	D	R	D	G	T	I	I	H	L	K	Y	P	L	N	C	S
Template Known Secondary structure		T	T								S	S	S	S	S									T	T										S	S	S					T	T	S				S											T	T		S		B			S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	T	E	E	W	F	F	K	G	I	S	R	K	D	A	E	R	Q	L	L	A	P	G	N	M	L	G	S	F	M	I	R	D	S	E	T	T	K	G	S	Y	S	L	S	V	R	D	Y	D	P	R	Q	G	D	T	V	K	H	Y	K	I	R	T	L	D	N	G	G	F	Y	I	S	P	R	S	T	F	S
Query Conservation
Alig confidence																											.																																						.
Template Conservation																											.																																						.
Template Sequence		D	P	T	S	E	R	W	Y	H	G	H	M	S	G	G	Q	A	E	T	L	L	Q	A	K	G	.	E	P	W	T	F	L	V	R	E	S	L	S	Q	P	G	D	F	V	L	S	V	L	S	D	Q	P	K	S	P	L	R	V	T	H	I	K	V	.	M	C	E	G	G	R	Y	T	V	G	G	L	E	T	F	D
Template Known Secondary structure			G	G	G		T	T	B		T	T															.		T	T								S	S	S	T	T																							.	B			T	T	S	B	B	S	S	S	S			B	S
Template Predicted Secondary structure																											.																																						.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		218	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		T	L	Q	E	L	V	D	H	Y	K	K	G	.	.	.	.	N	D	G	L	C	Q	K	L	S	V	P
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		S	L	T	D	L	V	E	H	F	K	K	T	G	I	E	E	A	S	G	A	F	V	Y	L	R	Q	P
Template Known Secondary structure		S																S	S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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