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Job DescriptionP08631
Confidence100.00%DateThu Apr 26 09:51:20 BST 2012
Rank121Aligned Residues247
% Identity22%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280... ......290... ......300.........310. ........320.... .....
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Query Sequence  IPRESLKLEKKLGAGQFGEVWMATYNK. HTKVAVKTMK. . . . PGSMSVEAFLAEANVMKT. LQHDKLVKLHAVV. TKEPI
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL
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STT
SSTTT

GGG

STTTTTTTSSTTB


B
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN
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Template Sequence  FFVIEYVNGGDLMFHMQRQR. . KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP
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T
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   320.........330......... 340.........350.........360.........370.........380.........390.......
 
   410.........420.........430.........440.........450.........460.........470.........480.........
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Query Sequence  EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNI
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Template Sequence  GDTTSF. . CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILE. KQIRIPRSMSVKAASV
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   398.400... ......410.........420.........430........ .440.........450....... ..460.........470...
 
   490.........500... ......
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Query Sequence  MMRCWKNRPEERPT. . . . . . FEYIQS
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQG
Template Known Secondary structure  T
SSSTTSTTTSTTT
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   484.....490.........500.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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