Job Description P08631 Confidence 99.89% Date Thu Apr 26 09:51:20 BST 2012 Rank 303 Aligned Residues 101 % Identity 27% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		L	E	T	E	E	W	F	F	K	G	I	S	R	K	D	A	E	R	Q	L	L	A	P	G	N	M	L	G	S	F	M	I	R	D	S	E	T	T	K	G	S	Y	S	L	S	V	R	D	Y	D	P	R	Q	G	D	T	V	K	H	Y	K	I	R	T	L	D	N	G	G	F	Y	I	S	P	.	.	.	.	.	R
Query Conservation																																																																												.	.	.	.	.
Alig confidence																										.																							.	.	.	.	.																							.	.	.	.	.
Template Conservation																										.																							.	.	.	.	.
Template Sequence		M	D	A	V	A	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	.	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	.	.	.	.	.	Y	H	G	Y	I	Y	T	Y	R	V	S	Q	T	E	T	G	S	W	S	A	E	T	A	P	G	V	H	K
Template Known Secondary structure						S	S	B			S															.		T	T								S	S	S	T	T								.	.	.	.	.	S	S	S											T	T	S							S	T	T	S
Template Predicted Secondary structure																										.																							.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	F	S	T	L	Q	E	L	V	D	H	Y	K	K	G	N	D	G	L	C	Q	K	L	S	V	P	C	M	S	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	F	R	K	I	K	N	L	I	S	A	F	Q	K	P	D	Q	G	I	V	I	P	L	Q	Y	P	V	E	K	K	S
Template Known Secondary structure					S	S								T	T	S	S		S	S	S	S	S				S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions