Job Description A0PJX2 Confidence 1.33% Date Wed Jun 6 09:34:40 BST 2012 Rank 91 Aligned Residues 60 % Identity 28% Template c2l23A_ PDB info PDB header:transcription Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 25; PDBTitle: nmr structure of the acid (activator interacting domain) of the human2 mediator med25 protein Resolution UNK

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.														.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	L	S	F	H	F	P	P	R	V	T	G	H	P	W	S	L	V	F	C	T	S	R	D	G	F	S	L	Q	S	L	Y	R	R	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	S	G	P	V	L	L	V	L	R	D	Q	D	G	Q	I	F	G	A	F	S	S
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	L	L	T	T	L	G	P	L	F	R	N	S	R	M	V	Q	F	H	F	T	N	K	D	L	E	S	L	K	G	L	Y	R	I	M	G	N	G	F	A	G	C	V	H	F	P	H	T	A	P	C	E	V	R	V	L	M	L	L	Y	S	S	K	K	K	I	F	M	G	L	I	P
Template Known Secondary structure		G	G	G	G	G	G	G					S	S											S		S																						S	S	S													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions