Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 122 Aligned Residues 253 % Identity 25% Template c4eqmE_ PDB info PDB header:transferase Chain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb Resolution 3.00 Å

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		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.					.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		E	I	C	R	T	D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	Y	G	N	T	V	A	V	K	T	L	K	E	.	.	.	.	D	T	M	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	P	N	L	V	Q	L	I	G	V	C	T	R	E	P	P	F
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.
Template Conservation
Template Sequence		K	I	I	N	E	R	Y	K	I	V	D	K	L	G	G	G	G	M	S	T	V	Y	L	A	E	D	T	I	L	N	I	K	V	A	I	K	A	I	F	I	P	P	R	E	K	E	E	T	L	K	R	F	E	R	E	V	H	N	S	S	Q	L	S	H	Q	N	I	V	S	M	I	D	V	D	E	E	D	D	C	Y
Template Known Secondary structure		T				T	T											T	T									T	T	T													S	S																	T	T				T	T	B										T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	I	T	E	F	M	S	H	G	N	L	L	D	F	L	R	S	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	N	K	L	V	K	V	A	D	F	G	L	A	R	L	M	R	D	D
Query Conservation
Alig confidence																							.	.																																																				.	.	.	.	.	.
Template Conservation																							.	.																																																				.	.	.	.	.	.
Template Sequence		Y	L	V	M	E	Y	I	E	G	P	T	L	S	E	Y	I	E	S	H	G	P	.	.	L	S	V	D	T	A	I	N	F	T	N	Q	I	L	D	G	I	K	H	A	H	D	M	R	I	V	H	R	D	I	K	P	Q	N	I	L	I	D	S	N	K	T	L	K	I	F	D	F	G	I	A	.	.	.	.	.	.
Template Known Secondary structure										S		B								S		S	.	.			S	S																			T	T								G	G	G					T	T												.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																																																				.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.					.	.	.	610	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	L	T	D	V	Y	H	K	L	D	K	G	Y	R	M	E	.	.	.	.	R	P	P	G	C	P	P	E
Query Conservation																																																																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																			.																									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																			.
Template Sequence		.	.	.	.	.	.	.	.	.	K	T	V	Q	Y	F	S	P	E	Q	A	K	G	E	A	T	D	E	C	T	D	I	Y	S	I	G	I	V	L	Y	E	M	L	V	.	G	E	P	P	F	N	G	E	T	A	V	S	I	A	I	K	H	I	Q	D	S	V	P	N	V	T	T	D	V	R	K	D	I	P	Q	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.			G	G	G								T					T																	.	S	S		S				S	S								T	T	T	S									S		T	T	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																			.
Template SS confidence
											156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		V	Y	D	L	M	R	Q	C	W	Q	W	D	A	T	D	R	.	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q	E	S	S	I	T	E	A	V
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		L	S	N	V	I	L	R	A	T	E	K	D	K	A	N	R	Y	K	T	I	Q	E	M	K	D	D	L	S	S	V	L	H	E	N	R	A	N	E	D	V
Template Known Secondary structure										T		S	S	T	T	T	S		S	S											T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions