Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 114 Aligned Residues 269 % Identity 19% Template c3sv0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:casein kinase i-like; PDBTitle: crystal structure of casein kinase-1 like protein in plant Resolution 2.00 Å

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		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	Y	G	N	T	V	A	V	K	T	L	K	E	D	T	M	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	P	N	L	V	Q	L	I	G	V	C	T	R	E	P	P	F	Y	I	I	T	E	F	M	S
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		N	K	F	R	L	G	R	K	I	G	S	G	S	F	G	E	I	Y	L	G	T	N	I	Q	T	N	E	E	V	A	I	K	L	E	N	V	K	T	K	H	.	P	Q	L	L	Y	E	S	K	I	Y	R	I	L	Q	G	G	T	G	I	P	N	V	R	W	F	G	V	E	G	D	Y	N	V	L	V	M	D	L	L
Template Known Secondary structure		T	T											S	S									T	T	T											T	T		S	S	.													T	T	T	S	T	T											T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520				.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.																			.	.	.	.	.
Query SS confidence																																																								.	.	.																			.	.	.	.	.
Query Sequence		H	G	N	L	L	D	F	L	R	S	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	.	.	.	N	K	L	V	K	V	A	D	F	G	L	A	R	L	M	R	D	D	.	.	.	.	.
Query Conservation																																																								.	.	.																			.	.	.	.	.
Alig confidence															.																																									.	.	.																			.	.	.	.	.
Template Conservation															.
Template Sequence		G	P	S	L	E	D	L	F	N	F	C	S	R	.	K	L	S	L	K	T	V	L	M	L	A	D	Q	M	I	N	R	V	E	F	V	H	S	K	S	F	L	H	R	D	I	K	P	D	N	F	L	M	G	L	G	R	R	A	N	Q	V	Y	I	I	D	F	G	L	A	K	K	Y	R	D	T	S	T	H	Q	H
Template Known Secondary structure				B								T	T	T	.																								T	T								G	G	G						G	G	G	T	T								T	T					B		T	T	T			B
Template Predicted Secondary structure															.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
			539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.								.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure		.																																																							.	.	.	.	.	.	.
Query SS confidence		.																																																							.	.	.	.	.	.	.
Query Sequence		.	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	L	.	.	.	.	.	.	.	T	D	V	Y	H	K	L	D	K	G	Y	R	M	E	R	P	P	G
Query Conservation		.																																																							.	.	.	.	.	.	.
Alig confidence		.																																												.											.	.	.	.	.	.	.
Template Conservation																																														.
Template Sequence		I	P	Y	R	E	N	K	N	L	T	G	T	A	R	Y	A	S	V	N	T	H	L	G	I	E	Q	S	R	R	D	D	L	E	S	L	G	Y	V	L	M	Y	F	L	R	.	G	S	L	P	W	Q	G	L	K	A	G	T	K	K	Q	K	Y	E	K	I	S	E	K	K	V	A	T	S	I	E	A	L	C	R	G
Template Known Secondary structure												S		T	T	T							T	T																						.	S	S		T	T	S	S				S	S															S							T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	P	E	V	Y	D	L	M	R	Q	C	W	Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q	E	S	S	I	T	E	A	V	E	K	Q	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	T	E	F	A	S	Y	F	H	Y	C	R	S	L	R	F	D	D	K	P	D	Y	S	Y	L	K	R	L	F	R	D	L	F	I	R	E	G	F	Q	F	D	Y	V	F	D	W	T
Template Known Secondary structure		S													T			T	T																			T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions