Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 148 Aligned Residues 249 % Identity 16% Template c3q60A_ PDB info PDB header:transferase Chain: A: PDB Molecule:rop5b; PDBTitle: crystal structure of virulent allele rop5b pseudokinase domain bound2 to atp Resolution 1.72 Å

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		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.					.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	Y	G	N	T	V	A	V	K	T	L	K	E	D	T	M	.	.	.	.	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	P	N	L	V	Q	L	I	G	V	C	T	R	E	P	P	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	V	E	P	L	R	V	G	D	R	S	V	V	F	L	V	R	D	V	E	R	L	E	D	F	A	L	K	V	F	T	M	G	A	E	N	S	R	S	E	L	E	R	L	H	E	A	T	F	A	A	A	R	L	L	G	R	L	L	L	P	S	D	A	V	A	V	Q	S	Q	P	P	F	A	Q	L	S	P
Template Known Secondary structure												S	S									T	T	T	T												S	T	T																						B										T	T	S		S	S	S	B		S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
								458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.						.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		.	.	.	.	.	.	F	Y	I	I	T	E	F	M	S	H	G	N	L	L	D	F	L	R	.	.	.	.	.	S	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	N	K	L	V	K	V
Query Conservation		.	.	.	.	.	.																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.									.										.	.	.	.	.
Template Conservation																.
Template Sequence		G	Y	A	V	A	N	Y	L	L	L	M	P	A	A	.	S	V	D	L	E	L	L	F	S	T	L	D	F	V	Y	V	F	R	G	D	E	G	I	L	A	L	H	I	L	T	A	Q	L	I	R	L	A	A	N	L	Q	S	K	G	L	V	H	G	H	F	T	P	D	N	L	F	I	M	P	D	G	R	L	M	L
Template Known Secondary structure																.	S													S																													T	T				T	T		S	G	G	G					T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.			.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		A	D	F	G	L	A	R	L	M	R	D	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	.	.	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	L	T	D	V	Y	H	K	L	D	K	G	Y	R
Query Conservation																																		.	.
Alig confidence																	.	.	.	.														.	.																								.
Template Conservation																	.	.	.	.																																							.
Template Sequence		G	D	V	S	A	L	W	K	V	G	T	R	G	P	A	.	.	.	.	S	S	V	P	V	T	Y	A	P	R	E	F	L	N	A	S	T	A	T	F	T	H	A	L	N	A	W	Q	L	G	L	S	I	Y	R	V	W	C	.	L	F	L	P	F	G	L	V	T	P	G	I	K	G	S	W	K	R	P	S	L	R
Template Known Secondary structure				G	G	G				T	T					G	.	.	.	.	G	G	S		G	G	G							T		S																							.	S	S		S	T	T	B			T	T		T	T				B			T	T
Template Predicted Secondary structure																	.	.	.	.																																							.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420					.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		605	.	.	.	.									610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.
Query Sequence		M	E	R	P	P	.	.	.	.	.	.	.	.	G	C	P	P	E	V	Y	D	L	M	R	Q	C	W	Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q	E
Query Conservation							.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																										.	.	.
Template Sequence		V	P	G	T	D	S	L	A	F	G	S	C	T	P	L	P	D	F	V	K	T	L	I	G	R	F	L	N	F	D	R	R	R	R	L	L	P	L	E	A	.	.	.	M	E	T	P	E	F	L
Template Known Secondary structure		S					S				T	T	S	S														T		S	S	T	T	T								.	.	.	T	T	S
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520				.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions