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Job DescriptionA8JNU2
Confidence100.00%DateTue Jan 22 11:54:53 GMT 2013
Rank29Aligned Residues266
% Identity25%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   381........390... ......400.........410.........420.........430.........440.........450......
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Query Sequence  EWEICRTDIMMKH. . . . KLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREP
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Template Sequence  GMYVRKKEGKIGESYFKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFDVFEDKK
Template Known Secondary structure  GGG


S
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   43......50.........60.........70.........80.........90 .........100.........110.........120
 
   457..460.........470.........480.........490.........500.........510........ .520.........530...
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Query Sequence  PFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLV. . . GDNKLVKVADFGLAR
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Template Sequence  YFYLVTEFYEGGELFEQIINRHK. . FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS
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TT
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SGGGSSTT

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TT
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   139140.........150.........160. ........170.........180.........190.........200.........210......
 
   534.....540.........550.........560.........570.........580.........590.........600........ .
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Query Sequence  LMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERP. . . . P
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Template Sequence  FFSKDYKLRD. . RLGTAYYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKG. KYYFDFNDWK
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   217..220...... ...230.........240. ........250.........260. ........270.........280. ........290.
 
   610.........620.........630.........640.........650........
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Query Sequence  GCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEAVEKQLN
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Template Sequence  NISDEAKELIKLMLTYDYNKRCTAEEA. . . LNSRWIKKYANNINKSDQK
Template Known Secondary structure  TS
T
SSTTTS

...TST




GGG
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   292.......300.........310........ .320.........330.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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