Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 100 Aligned Residues 243 % Identity 23% Template c3p23B_ PDB info PDB header:hydrolase, transferase Chain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp Resolution 2.70 Å

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		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																					.																																							.
Query SS confidence																					.																																							.
Query Sequence		I	C	R	T	D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	.	V	Y	E	A	V	W	K	R	Y	G	N	T	V	A	V	K	T	L	K	E	D	T	M	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	.	K	H	P	N	L	V	Q	L	I	G	V	C	T	R	E	P	P	F	Y	I	I
Query Conservation																					.																																							.
Alig confidence																					.								.	.																	.	.												.
Template Conservation																													.	.																	.	.
Template Sequence		V	G	K	I	S	F	C	P	K	D	V	L	G	H	G	A	E	G	T	I	V	Y	R	G	M	F	D	.	.	N	R	D	V	A	V	K	R	I	L	P	E	C	F	S	F	.	.	A	D	R	E	V	Q	L	L	R	E	S	D	E	H	P	N	V	I	R	Y	F	C	T	E	K	D	R	Q	F	Q	Y	I	A
Template Known Secondary structure			S	S		B											S	T	T								S	S	.	.	S	S									T	T	T				.	.										T	S				T	T	B										S	S
Template Predicted Secondary structure																													.	.																	.	.
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.			.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.			.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.						.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		T	E	F	M	S	H	G	N	L	L	D	F	L	R	S	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	N	K	L	.	.	.	.	.	V	K	V	A	D	F	G	L	A	R	L	M	R
Query Conservation																																																																.	.	.	.	.
Alig confidence							.													.																																												.	.	.	.	.													.
Template Conservation							.													.																																																													.
Template Sequence		I	E	L	C	A	.	A	T	L	Q	E	Y	V	E	Q	K	D	F	.	A	H	L	G	L	E	P	I	T	L	L	Q	Q	T	T	S	G	L	A	H	L	H	S	L	N	I	V	H	R	D	L	K	P	H	N	I	L	I	S	M	P	N	A	H	G	K	I	K	A	M	I	S	D	F	G	L	C	K	K	L	.
Template Known Secondary structure						S	.									S	S	S		.	S			S	S																			T	T							S	G	G	G							B	T	T	T	B									S						.
Template Predicted Secondary structure							.													.																																																													.
Template SS confidence
		642	.	.	.	.		.	.	.	650	.	.	.	.	.	.	.	.		.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.			.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		D	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	L	T	D	V	Y	H	K	L	D	K	G	Y	.	.	R	M	E	R	P	P	G	C	P	P	E
Query Conservation																																																																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																											.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	A	P	G	T	E	G	W	I	A	P	E	M	L	S	E	E	N	P	T	Y	T	V	D	I	F	S	A	G	C	V	F	Y	Y	V	I	S	E	G	S	H	P	F	G	K	S	L	Q	R	Q	A	N	I	L	L	G	A	C	S	L	D	C	L	H	P	E	K	H	E	D	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.					T	T	S			G	G	G	G	T						T																	T	S			S	S												T	T					T	T	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	D	L	M	R	Q	C	W	Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		A	R	E	L	I	E	K	M	I	A	M	D	P	Q	K	R	P	S	A	K	H	V	.	.	.	L	K	H	P	F	F
Template Known Secondary structure										T		S	S	G	G	G								.	.	.		T	S	G	G	G
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.				.	.	.	830	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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