Return to main results Retrieve Phyre Job Id

Job DescriptionA8JNU2
Confidence100.00%DateTue Jan 22 11:54:53 GMT 2013
Rank46Aligned Residues247
% Identity29%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   387..390.........400.........410.........420.........430.........440.........450.........460......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  TDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMS
Query Conservation          

 
 

 
           



              
      
 
 


              
 
   
Alig confidence 









...

























..






































Template Conservation    
     

... 
 
            


 
     ..     

 

  
 




 
           



   
Template Sequence  EMYQRVKKLG. . . SGEVLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
Template Known Secondary structure  ...

TTT



TT..TT


TTB


SS


Template Predicted Secondary structure 

...




..









Template SS confidence 















































































   60......... 70.........80.........90..... ....100.........110.........120.........130....
 
   467..470.........480.........490.........500.........510........ .520.........530.........540...
Predicted Secondary structure 


















...
















Query SS confidence 



















































. . .
























Query Sequence  HGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLV. . . GDNKLVKVADFGLARLMRDDTYTAH
Query Conservation   
 
   
                  

  

 


    





  
 
 ...      

 




           
Alig confidence 












..




































...
























Template Conservation   
 
         ..           

   
  

     
      

           
  


             
Template Sequence  GGELFDEIIHRMK. . FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE
Template Known Secondary structure  S
BSS..

TT
S

SGGGS
SSTT




TT

BTTB
B

Template Predicted Secondary structure 





..




































Template SS confidence 















































































   143......150..... ....160.........170.........180.........190.........200.........210.........220
 
   544.....550.........560.........570.........580.........590.........600... ......610.........620
Predicted Secondary structure 

























...








Query SS confidence 



























































. . .
















Query Sequence  AGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGY. . . RMERPPGCPPEVYDLMR
Query Conservation            


           



 
  
 
    
  
            
    ...                 
Alig confidence  ..














.



















.




















...
















Template Conservation  ..   
  
 


    .     






 




  .
  

       
   
               
     

 
Template Sequence  . . RLGTAYYIAPEVLRK. KYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK
Template Known Secondary structure  ..

S
TTT

TT.
B
T.SS
SS

SST




SGGGTTS
Template Predicted Secondary structure  ..







.








.





















Template SS confidence 















































































   221........230..... ....240.........250..... ....260.........270.........280.........290......
 
   621........630.........640.......
Predicted Secondary structure 







Query SS confidence 


























Query Sequence  QCWQWDATDRPTFKSIHHALEHMFQES
Query Conservation        
  

        
       
Alig confidence 















...







Template Conservation    
  

  
 
  
 ...
 
     
Template Sequence  QMLQFDSQRRISAQQA. . . LEHPWIKE
Template Known Secondary structure  T
SSTTTS

...T
Template Predicted Secondary structure 






...

Template SS confidence 


























   297..300.........310.. .......320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions