Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 176 Aligned Residues 251 % Identity 24% Template c3i6uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase Resolution 3.00 Å

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		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		R	T	D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	Y	G	N	T	V	A	V	K	T	L	K	E	D	T	M	.	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	P	N	L	V	Q	L	I	G	V	C	T	R	E	P	P	F	Y	I	I	T	E	F
Query Conservation																																										.
Alig confidence																																										.																																	.
Template Conservation																																																																											.
Template Sequence		R	D	E	Y	I	M	S	K	T	L	G	S	G	A	C	G	E	V	K	L	A	F	E	R	K	T	C	K	K	V	A	I	R	I	I	S	K	R	K	F	A	I	G	L	N	V	E	T	E	I	E	I	L	K	K	L	N	H	P	C	I	I	K	I	K	N	F	F	D	A	E	D	Y	.	Y	I	V	L	E	L
Template Known Secondary structure			T	T											S	S	S								T	T	T											G	G	G	G	T	T																	T	T	B									S	S			.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.				520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		M	S	H	G	N	L	L	D	F	L	R	S	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	.	.	.	D	N	K	L	V	K	V	A	D	F	G	L	A	R	L	M	R	D	D	T	Y	T
Query Conservation																																																									.	.	.
Alig confidence																	.	.																																							.	.	.																		.	.	.	.	.
Template Conservation																	.	.																																																											.	.	.	.	.
Template Sequence		M	E	G	G	E	L	F	D	K	V	V	G	N	K	R	.	.	L	K	E	A	T	C	K	L	Y	F	Y	Q	M	L	L	A	V	Q	Y	L	H	E	N	G	I	I	H	R	D	L	K	P	E	N	V	L	L	S	S	Q	E	E	D	C	L	I	K	I	T	D	F	G	H	S	K	I	L	G	.	.	.	.	.
Template Known Secondary structure			T	T		B	G	G	G	G	T	S	S	S			.	.																							T	T				S				G	G	G				S	S	S	S	S	S								S	S	T	T	T	S			.	.	.	.	.
Template Predicted Secondary structure																	.	.																																																											.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.		.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.				.	610	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.																		.	.	.
Query SS confidence																																																				.																		.	.	.
Query Sequence		A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	.	L	T	D	V	Y	H	K	L	D	K	G	Y	R	M	E	R	P	.	.	.	P	G	C	P	P	E	V	Y	D
Query Conservation																																																				.																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																.										.																		.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																.
Template Sequence		.	.	.	.	.	.	.	.	.	P	T	Y	L	A	P	E	V	L	V	A	G	Y	N	R	A	V	D	C	W	S	L	G	V	I	L	F	I	C	L	S	.	G	Y	P	P	F	S	E	H	R	T	Q	V	S	L	K	D	Q	I	T	S	G	K	Y	N	F	I	P	E	V	W	A	E	V	S	E	K	A	L	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		T	T			T	T	T	T			T	T																			.	S	S		S	S				S	S	S									T	T										T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																.
Template SS confidence
											388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	R	Q	C	W	Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q	E	S	S	I	T	E	A	V	E	K	Q	L
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		L	V	K	K	L	L	V	V	D	P	K	A	R	F	T	T	E	E	A	.	.	.	L	R	H	P	W	L	Q	D	E	D	M	K	R	K	F	Q	D	L
Template Known Secondary structure							S		S	S	T	T	T	S							.	.	.			S	G	G	G
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions