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Job DescriptionA8JNU2
Confidence100.00%DateTue Jan 22 11:54:53 GMT 2013
Rank197Aligned Residues241
% Identity28%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400.........410.........420. ........430.........440.........450.........460.........470
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Query Sequence  LGGGQYGEVYEAVWKRYGNTVAVKTLK. . . . EDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNL
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Template Sequence  KKLGSYGEVLLCKDK. TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL
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   27..30.........40. ........50.........60.........70.........80.........90.........100.....
 
   471........480.........490.........500.........510......... 520.........530.........540........
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Query Sequence  LDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVG. . DNKLVKVADFGLARLMRDDTYTAHAGAKF
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Template Sequence  FDEIILRQK. . FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSDALIKIVDFGLS. . . . . . . . . AHFERLG
Template Known Secondary structure  SS..

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   109110....... ..120.........130.........140.........150.........160.........170 .......
 
   549550.........560.........570.........580.........590.........600... ......610.........620.....
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Query Sequence  PIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGY. . . RMERPPGCPPEVYDLMRQCWQW
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Template Sequence  TAYYIAPEVLR. KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTY
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   186...190...... ...200.........210....... ..220.........230.........240.........250.........260...
 
   626...630.........640.........650..
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Query Sequence  DATDRPTFKSIHHALEHMFQESSITEA
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Template Sequence  EPSKRISAEEA. . . LNHPWIVKFCSQK
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   264.....270.... .....280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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