Return to main results Retrieve Phyre Job Id

Job DescriptionA8JNU2
Confidence99.44%DateTue Jan 22 11:54:53 GMT 2013
Rank466Aligned Residues71
% Identity20%Templatec2ysqA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 9; PDBTitle: solution structure of the sh3 domain from rho guanine2 nucleotide exchange factor 9
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   199200.........210.........220.........230.........240.........250.........260.........270.
Predicted Secondary structure 

















































Query SS confidence 








































































Query Sequence  APGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVRILSYNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLEKHS
Query Conservation                                                         
  
              
Alig confidence 
















































..





















Template Conservation    
        
 




 
    



  

 
 

      

    .. 
  
  
  


         
Template Sequence  SSGSSGDSIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQI. . DDEEGWFPASFVRLWVNQEDEV
Template Known Secondary structure 








SS



SSSSS



TT


SSS
..SS
GGGSS





Template Predicted Secondary structure 

























..










Template SS confidence 








































































   2.......10.........20.........30.........40.........50 .........60.........70..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions