Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 124 Aligned Residues 235 % Identity 25% Template c2wqmA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase nek7; PDBTitle: structure of apo human nek7 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.					.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		T	D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	Y	G	N	T	V	A	V	K	T	L	K	.	.	.	.	E	D	T	M	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	P	N	L	V	Q	L	I	G	V	C	T	R	E	P	P	F	Y	I	I	T
Query Conservation																																					.	.	.	.
Alig confidence														.	.																						.	.	.	.
Template Conservation														.	.
Template Sequence		A	N	F	R	I	E	K	K	I	G	R	G	.	.	S	E	V	Y	R	A	A	C	L	L	D	G	V	P	V	A	L	K	K	V	Q	I	F	D	L	M	D	A	K	A	R	A	D	C	I	K	E	I	D	L	L	K	Q	L	N	H	P	N	V	I	K	Y	Y	A	S	F	I	E	D	N	E	L	N	I	V	L
Template Known Secondary structure		G	G											.	.									T	T	T											T	T	S	S																		T				T	T	B										T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.			.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		E	F	M	S	H	G	N	L	L	D	F	L	R	S	A	.	.	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	N	K	L	V	K	V	A	D	F	G	L	A	R	L	M	R	D	D	T	Y
Query Conservation																	.	.
Alig confidence																	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	A	D	A	G	D	L	S	R	M	I	K	H	F	K	K	Q	K	R	L	I	P	E	R	T	V	W	K	Y	F	V	Q	L	C	S	A	L	E	H	M	H	S	R	R	V	M	H	R	D	I	K	P	A	N	V	F	I	T	A	T	G	V	V	K	L	G	D	L	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S		B											T	T																									T	T								G	G	G					T	T	S								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	L	T	D	V	Y	H	K	L	D	K	G	Y	R	M	E	R	P	P	G	C	P	P	E	V	Y	D	L	M	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																		.
Template Conservation		.	.	.	.	.	.	.	.																																		.
Template Sequence		.	.	.	.	.	.	.	.	T	P	Y	Y	M	S	P	E	R	I	H	E	N	G	Y	N	F	K	S	D	I	W	S	L	G	C	L	L	Y	E	M	A	A	.	L	Q	S	P	F	Y	M	N	L	Y	S	L	C	K	K	I	E	Q	C	D	Y	P	P	L	P	S	D	H	Y	S	E	E	L	R	Q	L	V	N
Template Known Secondary structure		.	.	.	.	.	.	.	.			S	S							T	T																						.	S	S		T	T													T	T		S					T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																		.
Template SS confidence
										199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	W	Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	C	I	N	P	D	P	E	K	R	P	D	V	T	Y	V	Y	D	V	A	K	R	M
Template Known Secondary structure				T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions