278 c2vagA_ Probab=100.00  E-value=2.2e-42  Score=279.98  Aligned_columns=260  Identities=24%

Q ss_pred             EECHHHEEEEHHCCCCCCEEEEEEEE-CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCE------EEEEEEEEEC
Q ss_conf             10576842201106788717999999-7899789999846981429999999999985499847------6799999728
Q batch____       383 EICRTDIMMKHKLGGGQYGEVYEAVW-KRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNL------VQLIGVCTRE  455 (1638)
Q Consensus       383 ~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~~~~l~h~ni------v~~~~~~~~~  455 (1638)
                      |+-..++++.++||+|+||.||+|++ +.+++.||||+++.+....+.+++|+++|++|+|+||      +.+++.+...
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEEC
Q ss_conf             91399997578876899999568877889999999999999999999789134766746668738883798324100003
Q batch____       456 PPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLM  535 (1638)
Q Consensus       456 ~~~~~v~E~~~~g~l~~~l~~~~~~~~~~~~~~~~~~qi~~gl~ylh~~~~iHrDlk~~N~l~~~~~~~ki~DFGla~~~  535 (1638)
                      ..++++++++.++.+..+...... .+.......++.+++.+|.|+|..+++|||+|++|||++.++.+++.|||.++..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~  167 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKENGFL-PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTL  167 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEE
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCC
T ss_conf             000012211236752111222111-0136565555544555554311012222345541589857886200034543344


Q ss_pred             CCC----------CCHHCCCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC----
Q ss_conf             564----------200014753585667856982688871689999999999999659587788899999999981----
Q batch____       536 RDD----------TYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDK----  601 (1638)
Q Consensus       536 ~~~----------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dvws~G~~l~e~~~~g~~p~~~~~~~~~~~~i~~----  601 (1638)
                      ...          ..........+..|++||......+..+.|+|++||++|++.+ +..|+...+..+.+..+..    
T Consensus       168 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~  246 (330)
T c2vagA_         168 INPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGP  246 (330)
T ss_dssp             SCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCS
T ss_pred             CCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             44321000146633267542001210232100000111123542102258731004-88988758968999999851388


Q ss_pred             ---------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
Q ss_conf             ---------------------------------------89878875578889999998613797778899999999987
Q batch____       602 ---------------------------------------GYRMERPPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEH  642 (1638)
Q Consensus       602 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~p~~Rp~~~~~~~~l~~  642 (1638)
                                                             ......+..+++++++||.+||+.||++|||+++|   |+|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~el---L~H  323 (330)
T c2vagA_         247 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA---LKH  323 (330)
T ss_dssp             CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH---TTS
T ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHH---HCC
T ss_conf             99889744201212354656653210001110012333100235654589999999998665881117767899---679


Q ss_pred             HHHHC
Q ss_conf             65210
Q batch____       643 MFQES  647 (1638)
Q Consensus       643 ~~~~~  647 (1638)
                      +|++.
T Consensus       324 p~f~~  328 (330)
T c2vagA_         324 PFFDL  328 (330)
T ss_dssp             GGGGG
T ss_pred             CCHHH
T ss_conf             11440


