Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 10 Aligned Residues 318 % Identity 34% Template c2j0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains. Resolution 3.0 Å

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		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.								370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																				.	.	.	.	.	.	.
Query SS confidence																					.																																				.	.	.	.	.	.	.
Query Sequence		V	Y	H	Y	R	I	S	E	D	P	D	G	K	V	F	V	T	Q	E	.	A	K	F	N	T	L	A	E	L	V	H	H	H	S	V	P	H	E	G	H	G	L	I	T	P	L	L	Y	P	A	P	K	Q	N	K	.	.	.	.	.	.	.	P	T	V	F	P	L	S	P	E	P	D	E	W	E	I	C	R	T
Query Conservation																					.																																				.	.	.	.	.	.	.
Alig confidence																					.																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	Q	L	K	I	A	G	A	P	E	P	L	T	V	T	A	P	S	L	T	I	A	E	N	M	A	D	L	I	D	G	Y	C	R	L	V	N	G	A	T	Q	S	F	I	I	R	P	G	V	R	S	H	T	D	D	Y	A	E	I	I	D	E	E	D	T	Y	T	M	P	S	T	R	D	Y	E	I	Q	R	E
Template Known Secondary structure								S	S		S	S							S	S																			T	T			S			B						S															T	T	S					S	T	T	B			G	G
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.				.	.	.	.	.	.	420	.	.			.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																												.	.	.										.	.
Query SS confidence																												.	.	.										.	.
Query Sequence		D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	Y	G	N	.	.	.	T	V	A	V	K	T	L	K	E	.	.	D	T	M	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	P	N	L	V	Q	L	I	G	V	C	T	R	E	P	P	F	Y	I	I	T
Query Conservation																												.	.	.										.	.
Alig confidence																												.	.	.										.	.																																.
Template Conservation																																																																									.
Template Sequence		R	I	E	L	G	R	C	I	G	E	G	Q	F	G	D	V	H	Q	G	I	Y	M	S	P	E	N	P	A	M	A	V	A	I	K	T	C	K	N	C	T	S	D	S	V	R	E	K	F	L	Q	E	A	L	T	M	R	Q	F	D	H	P	H	I	V	K	L	I	G	V	I	T	.	E	N	P	V	W	I	I	M
Template Known Secondary structure		G											S	S											S	S	S											T	T	T	T	S															T	T				T	T	B									.	S	S	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.		.	.	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	M	S	H	G	N	L	L	D	F	L	R	S	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	N	K	L	V	K	V	A	D	F	G	L	A	R	L	M	R	D	D	T	Y	T	A
Query Conservation
Alig confidence																			.																																																							.	.	.	.	.	.	.	.
Template Conservation																			.																																																							.	.	.	.	.	.	.	.
Template Sequence		E	L	C	T	L	G	E	L	R	S	F	L	Q	V	R	K	F	.	S	L	D	L	A	S	L	I	L	Y	A	Y	Q	L	S	T	A	L	A	Y	L	E	S	K	R	F	V	H	R	D	I	A	A	R	N	V	L	V	S	A	T	D	C	V	K	L	G	D	F	G	L	S	R	L	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T		B								T	T	T	.	T																						T	T	T				S			S	G	G	G						T	T													.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																																							.	.	.	.	.	.	.	.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	L	T	D	V	Y	H	K	L	D	K	G	Y	R	M	E	R	P	P	G	C	P	P	E	V	Y	D	L	M	R	Q	C
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	P	I	K	W	M	A	P	E	S	I	N	F	R	R	F	T	S	A	S	D	V	W	M	F	G	V	C	M	W	E	I	L	M	H	G	V	K	P	F	Q	G	V	K	N	N	D	V	I	G	R	I	E	N	G	E	R	L	P	M	P	P	N	C	P	P	T	L	Y	S	L	M	T	K	C
Template Known Secondary structure		.	.	.	.	.	.		G	G	G																													T	T	S			T	T	T	T												T	T							T	T												T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q	E	S	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	A	Y	D	P	S	R	R	P	R	F	T	E	L	K	A	Q	L	S	T	I	L	E	E	E	K	L
Template Known Secondary structure		T		S	S	G	G	G	S																			T
Template Predicted Secondary structure
Template SS confidence
		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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