 |
| Job Description | A8JNU2 | | Confidence | 99.47% | Date | Tue Jan 22 11:54:53 GMT 2013 |
| Rank | 451 | Aligned Residues | 57 |
| % Identity | 12% | Template | c2j06B_ |
| PDB info |
PDB header:signal transduction | Chain: B: PDB Molecule:ras gtpase-activating protein 1; |
PDBTitle: crystal structure of the rasgap sh3 domain at 1.8 angstrom2 resolution
|
| Resolution | 1.8 Å |
|
 |
|   |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | L | F | V | A | L | Y | D | F | Q | A | G | G | E | . |
N | Q | L | S | L | K | K | G | E | Q | V | R | I | L | S | Y | N | K | S | G | E | W | C | E | A | H | S | D | S | G | N | V | G | W | V | P | S | N | Y | V | T | P | L |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |
|
|
|   |
|   |
|   |   |
|   |
|
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|
|
|   |
|
| Template Sequence |   |
R | R | V | R | A | I | L | P | Y | T | K | V | P | D | T | D | E | I | S | F | L | K | G | D | X | F | I | V | H | N | E | L | E | D | G | W | X | W | V | T | N | L | R | T | D | E | Q | G | L | I | V | E | D | L | V | E | E | V |
| Template Known Secondary structure |   |
|  |  |  |  | S | S |
| B |
|
|
| T | T | S | S | B |
|
| B |
| T | T |
|  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  | G | G | G |  |  |  |
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
282 | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|