Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 244 Aligned Residues 211 % Identity 27% Template c2hakH_ PDB info PDB header:signaling protein,transferase Chain: H: PDB Molecule:serine/threonine-protein kinase mark1; PDBTitle: catalytic and ubiqutin-associated domains of mark1/par-1 Resolution 2.60 Å

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		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.				.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		T	D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	Y	G	N	T	V	A	V	K	T	L	K	E	.	.	.	D	T	M	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	P	N	L	V	Q	L	I	G	V	C	T	R	E	P	P	F	Y	I	I	T	E
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.
Template Conservation
Template Sequence		G	N	Y	R	L	Q	K	T	I	G	K	G	N	F	A	K	V	K	L	A	R	H	V	L	T	G	R	E	V	A	V	K	I	I	D	K	T	Q	L	N	P	T	S	L	Q	K	L	F	R	E	V	R	I	M	K	I	L	N	H	P	N	I	V	K	L	F	E	V	I	E	T	E	K	T	L	Y	L	V	M	E
Template Known Secondary structure		T	T											S	S									T	T	T												T	T																						T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	S	H	G	N	L	L	D	F	L	R	S	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	N	K	L	V	K	V	A	D	F	G	L	A	R	L	M	R	D	D	T	Y	T	A	H
Query Conservation
Alig confidence																		.	.																																																							.	.	.	.	.	.	.	.
Template Conservation																		.	.																																																							.	.	.	.	.	.	.	.
Template Sequence		Y	A	S	G	G	E	V	F	D	Y	L	V	A	H	G	R	.	.	M	K	E	K	E	A	R	A	K	F	R	Q	I	V	S	A	V	Q	Y	C	H	Q	K	Y	I	V	H	R	D	L	K	A	E	N	L	L	L	D	G	D	M	N	I	K	I	A	D	F	G	F	S	N	E	F	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T		B											.	.																								S				S				G	G	G					T	T	S							T	T			S	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																																																							.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	L	T	D	V	Y	H	K	L	D	K	G	Y	R	M	E	R	P	P	G	C	P	P	E	V	Y	D	L	M	R	Q	C	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	G	P	E	V	D	V	W	S	L	G	V	I	L	Y	T	L	V	S	.	G	S	L	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	I	P	F	Y	M	S	T	D	C	E	N	L	L	K	K	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				S	.	S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S													T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.																		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q	E
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		V	L	N	P	I	K	R	G	S	L	E	Q	I	.	.	.	M	K	D	R	W	M	N
Template Known Secondary structure			S	S	G	G	G	S							.	.	.				S	T	T	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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