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Job DescriptionA8JNU2
Confidence100.00%DateTue Jan 22 11:54:53 GMT 2013
Rank90Aligned Residues258
% Identity24%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   387..390.........400.........410.........420.........430.........440.........450.........460......
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Query Sequence  TDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMS
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS
Template Known Secondary structure 
S



SSTTT

TT


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TTB


STT


T
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   7..10.........20.........30.........40...... ...50.........60.........70.........80.....
 
   467..470.........480.........490.........500.........510.........520.........530........ .540.....
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Query Sequence  HGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDD. TYTAHAG
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Template Sequence  GGELFDRIEPDIG. . MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK
Template Known Secondary structure  TGGGGSBTTTB..

TT
S

SGGG
TT




TT

TT

B
S
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   8990.........100. ........110.........120.........130.........140.........150.........160......
 
   546...550.........560... ......570.........580.........590.........600. ........610.........620..
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Query Sequence  AKFPIKWTAPEGLAYNKF. STKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDK. . GYRMERPPGCPPEVYDLMRQC
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Template Sequence  MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI
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S
GGGS

SSB
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S
SS

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TTSTTGGGT
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   167..170.........180.........190.........200... ......210.........220.........230.........240.....
 
   623......630.........640.........650.
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Query Sequence  WQWDATDRPTFKSIHHALEHMFQESSITE
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Template Sequence  LVENPSARITIPDI. . . KKDRWYNKPLKK
Template Known Secondary structure  S
SSTTTS

...TT
TTTT




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   246...250......... 260.........270.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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