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Job DescriptionA8JNU2
Confidence100.00%DateTue Jan 22 11:54:53 GMT 2013
Rank62Aligned Residues248
% Identity26%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   381........390.........400.........410.........420.. .......430.........440.........450......
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Query Sequence  EWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKE. . . . DTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREP
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT
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G..GG
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TTB


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   127..130 .........140.........150.........160.........170.........180.........190.........200....
 
   457..460.........470.........480.........490.........500.........510.........520.........530......
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Query Sequence  PFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMR
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Template Sequence  RVYLILEYAPLGTVYRELQKLSK. . FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . .
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TT
BSS..

TTT




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   205....210.........220....... ..230.........240.........250.........260.........270........
 
   537..540.........550.........560.........570.........580.........590.........600.........610......
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Query Sequence  DDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVY
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Template Sequence  . . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGAR
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GGG

GGGTTTTSSGGG.SS
TT

SSTT.




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   279280.........290.........300.........310.. .......320.........330.. .......340.....
 
   617..620.........630.........640.........650..
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Query Sequence  DLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEA
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Template Sequence  DLISRLLKHNPSQRPMLREV. . . LEHPWITANSSKP
Template Known Secondary structure  S
SSGGGS

...T

SS
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   358.360.........370....... ..380.........390
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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