Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 211 Aligned Residues 235 % Identity 22% Template c1zy5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase gcn2; PDBTitle: crystal structure of eif2alpha protein kinase gcn2: r794g2 hyperactivating mutant complexed with amppnp. Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.							.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		R	T	D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	Y	G	N	T	V	A	V	K	T	L	K	E	D	T	M	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	P	N	L	V	Q	L	I	G	V	C	T	.	.	.	.	.	.	R	E	P	P	F	Y
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	D	F	E	E	I	A	V	L	G	Q	G	A	F	G	Q	V	V	K	A	R	N	A	L	D	S	R	Y	Y	A	I	K	K	I	R	H	T	E	E	K	L	S	T	I	L	S	E	V	M	L	L	A	S	L	N	H	Q	Y	V	V	R	Y	Y	A	A	W	L	E	R	R	N	F	V	K	K	S	T	L	F
Template Known Secondary structure															S	S									T	T	T																	T	T	T								T	T				T	T	B												T	T
Template Predicted Secondary structure
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	T	E	F	M	S	H	G	N	L	L	D	F	L	R	S	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	N	K	L	V	K	V	A	D	F	G	L	A	R	L	M	R	D	D	T
Query Conservation
Alig confidence																							.																																																			.	.	.	.	.	.	.	.
Template Conservation																							.																																																			.	.	.	.	.	.	.	.
Template Sequence		I	Q	M	E	Y	C	E	N	G	T	L	Y	D	L	I	H	S	E	N	L	N	.	Q	Q	R	D	E	Y	W	R	L	F	R	Q	I	L	E	A	L	S	Y	I	H	S	Q	G	I	I	H	R	D	L	K	P	M	N	I	F	I	D	E	S	R	N	V	K	I	G	D	F	G	L	.	.	.	.	.	.	.	.
Template Known Secondary structure									S		B								S		T	T	.	T	T																					T	T				S				G	G	G					T	T	S						S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																																			.	.	.	.	.	.	.	.
Template SS confidence
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.		.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.				.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	D	L	T	D	V	Y	H	K	L	D	K	G	Y	.	.	.	R	M	E	R	P	P	G	C	P	P	E	V	Y
Query Conservation																																																																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.											.	.	.																						.		.	.																			.	.	.
Template Conservation		.	.	.	.	.	.	.	.											.	.	.																						.		.	.
Template Sequence		.	.	.	.	.	.	.	.	G	T	A	M	Y	V	A	T	E	V	.	.	.	L	H	Y	N	E	K	I	D	M	Y	S	L	G	I	I	F	F	E	M	I	Y	.	P	.	.	F	S	T	G	M	E	R	V	N	I	L	K	K	L	R	S	V	S	I	E	F	P	P	D	F	D	D	N	K	M	K	V	E	K
Template Known Secondary structure		.	.	.	.	.	.	.	.			G	G	G			T	T	T	.	.	.					T																S	.		.	.		S	S												T	S	T	T					T	T	S		T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.											.	.	.																						.		.	.
Template SS confidence
										886	.	.	.	890	.	.	.	.	.				.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.		.			.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.
		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	M	R	Q	C	W	Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q	E
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		K	I	I	R	L	L	I	D	H	D	P	N	K	R	P	G	A	R	T	L	.	.	.	L	N	S	G	W	L	P
Template Known Secondary structure								T		S		G	G	G	S							.	.	.		T	S	S		S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		956	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.				.	.	.	.	980	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions