Job Description A8JNU2 Confidence 100.00% Date Tue Jan 22 11:54:53 GMT 2013 Rank 239 Aligned Residues 252 % Identity 38% Template c1y6aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:vascular endothelial growth factor receptor 2; PDBTitle: crystal structure of vegfr2 in complex with a 2-anilino-5-aryl-oxazole2 inhibitor Resolution 2.10 Å

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		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																																						.																																	.
Query SS confidence																																						.																																	.
Query Sequence		L	S	P	E	P	D	E	W	E	I	C	R	T	D	I	M	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	E	A	V	W	K	R	.	Y	G	N	T	V	A	V	K	T	L	K	E	D	T	M	A	L	K	D	F	L	E	E	A	A	I	M	K	E	M	K	H	.	P	N	L	V	Q	L	I	G	V	C
Query Conservation																																						.																																	.
Alig confidence																																						.														.	.																		.
Template Conservation																																																				.	.
Template Sequence		L	P	Y	D	A	S	K	W	E	F	P	R	D	R	L	K	L	G	K	P	L	G	R	Q	V	I	E	A	D	A	F	G	I	D	K	T	A	T	C	R	T	V	A	V	K	M	L	T	H	S	.	.	E	H	R	A	L	M	S	E	L	K	I	L	I	H	I	G	H	H	L	N	V	V	N	L	L	G	A	C
Template Known Secondary structure										B			G	G	G																		S	T	T	S	S	S														.	.																			T	T	B
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		818	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.			.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.
			453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.						.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure		.																									.	.	.	.	.
Query SS confidence		.																									.	.	.	.	.
Query Sequence		.	T	R	E	P	P	F	Y	I	I	T	E	F	M	S	H	G	N	L	L	D	F	L	R	S	.	.	.	.	.	A	G	R	E	T	L	D	A	V	A	L	L	Y	M	A	T	Q	I	A	S	G	M	S	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	C	L	V	G	D	N	K	L	V	K	V
Query Conservation		.																									.	.	.	.	.
Alig confidence		.																									.	.	.	.	.
Template Conservation
Template Sequence		T	K	P	G	G	P	L	M	V	I	V	E	F	C	K	F	G	N	L	S	T	Y	L	R	S	K	R	N	E	F	V	P	Y	D	F	L	T	L	E	H	L	I	C	Y	S	F	Q	V	A	K	G	M	E	F	L	A	S	R	K	C	I	H	R	D	L	A	A	R	N	I	L	L	S	E	K	N	V	V	K	I
Template Known Secondary structure			S	S	S	S										T	T		B								T	T	T	S	B						B																						T	T				S				G	G	G					G	G	G
Template Predicted Secondary structure
Template SS confidence
		904	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590		.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	D	F	G	L	A	R	L	M	R	D	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	G	L	A	Y	N	K	F	S	T	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	A	I	.	D	L	T	D	V	Y	H	K	L	D	K	G	Y	R	M
Query Conservation																																																																		.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	D	F	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	W	M	A	P	E	T	I	F	D	R	V	Y	T	I	Q	S	D	V	W	S	F	G	V	L	L	W	E	I	F	S	L	G	A	S	P	Y	P	G	V	K	I	D	E	E	F	C	R	R	L	K	E	G	T	R	M
Template Known Secondary structure						G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G																													T	T	S			S	S	T	T				S										T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1043	.	.	.	.																				.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	P	P	G	C	P	P	E	V	Y	D	L	M	R	Q	C	W	Q	W	D	A	T	D	R	P	T	F	K	S	I	H	H	A	L	E	H	M	F	Q	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	P	D	Y	T	T	P	E	M	Y	Q	T	M	L	D	C	W	H	G	E	P	S	Q	R	P	T	F	S	E	L	V	E	H	L	G	N	L	L	Q	A	N
Template Known Secondary structure					T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1124	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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