Job Description A8JNU2 Confidence 99.56% Date Tue Jan 22 11:54:53 GMT 2013 Rank 411 Aligned Residues 125 % Identity 18% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	I	P	A	G	S	T	A	A	S	L	L	A	D	A	A	E	L	Q	Q	H	Q	Q	D	S	G	G	L	G	L	Q	G	S	S	L	G	G	G	H	S	S	T	T	S	V	F	E	S	A	H	R	W	T	S	K	E	N	L	L	A	P	G	P	E	E	D	D	P	Q	L	F	V	A	L	Y	D	F	Q	A
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		P	S	Q	P	A	E	A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	.	F	K	V	Q	A	Q	H	D	Y	T	A
Template Known Secondary structure														S	S																																															S	S			T	T			.						S	S		B
Template Predicted Secondary structure																																																																						.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.	.									.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.													.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.													.	.	.	.	.	.	.	.
Query Sequence		G	G	E	N	Q	L	S	L	K	K	G	E	Q	V	R	I	L	.	.	.	.	.	S	Y	N	K	S	G	E	W	C	E	A	H	.	.	.	.	.	.	.	.	S	D	S	G	N	V	G	W	V	P	S	N	Y	V	T	P	L
Query Conservation																			.	.	.	.	.													.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure			S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions