Return to main results Retrieve Phyre Job Id

Job DescriptionA8JNU2
Confidence100.00%DateTue Jan 22 11:54:53 GMT 2013
Rank255Aligned Residues276
% Identity21%Templatec1gngA_
PDB info PDB header:transferaseChain: A: PDB Molecule:glycogen synthase kinase-3 beta; PDBTitle: glycogen synthase kinase-3 beta (gsk3) complex with frattide2 peptide
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   369370.........380.........390.........400.........410.........420.........430.........440........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  KPTVFPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKDFLEEAAIMKEMKHPNLVQL
Query Conservation                            

 
 

 
           



              
      
 
 


  
Alig confidence 























































...




















Template Conservation                      
 
   

 
 

 

       
  



 
    ...     

 

  
 
 


  
Template Sequence  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK. . . RFKNRELQIMRKLDHCNIVRL
Template Known Secondary structure 

SSS
S

SSS
TTT

T...TS




TTB

Template Predicted Secondary structure 





















...






Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90. ........100.........110..
 
   449450....... ..460.........470...... ...480.........490.........500..... ....510.........520
Predicted Secondary structure 


......





.








.








Query SS confidence 








. . . . . .


















.




























.














Query Sequence  IGVCTREPP. . . . . . FYIITEFMSHGNLLDFLRS. AGRETLDAVALLYMATQIASGMSYLESRN. YIHRDLAARNCLVGD
Query Conservation           ......   
 
    
 
   
  .                

  

 


   . 





  
 
   
Alig confidence 








......


















.




























.














Template Conservation                   

 
                   
               
                       
Template Sequence  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD
Template Known Secondary structure 

SSTT



BTTS


TT
S


GGG
TT
Template Predicted Secondary structure 


























































Template SS confidence 















































































   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   521........530.........540.........550.........560.........570.........580.........590.........600
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  NKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLD
Query Conservation      

 




                     


           



 
  
 
    
  
            
 
Alig confidence 






















..



































.

















Template Conservation         


 
           ..                      
  
 
    
   .
            
  
 
Template Sequence  TAVLKLCDFGSAKQLVRGEPNVS. . ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL. GQPIFPGDSGVDQLVEII
Template Known Secondary structure  T



TTS


TTS



..


GGG

TT
SS

T.SS
S


SS
Template Predicted Secondary structure 















..




























.








Template SS confidence 















































































   193......200.........210..... ....220.........230.........240.........250. ........260.........
 
   601...... ..610.........620.........630.........640.........650..
Predicted Secondary structure 






............................

















Query SS confidence 






. . . . . . . . . . . . . . . . . . . . . . . . . . . .












































Query Sequence  KGYRMER. . . . . . . . . . . . . . . . . . . . . . . . . . . . PPGCPPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSITEA
Query Conservation         ............................                   
  

        
            
Alig confidence 






............................




























...












Template Conservation                                         
    


  

  

  



 

...
 

 
       
Template Sequence  KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA. . . CAHSFFDELRDPN
Template Known Secondary structure 
S


TT


S








S
TTS
S
SSGGGS

...TSGGGGGGG
TT
Template Predicted Secondary structure 




























...






Template SS confidence 















































































   271........280.........290.........300.........310.........320.........330.... .....340.......
 
   653
Predicted Secondary structure 
Query SS confidence 
Query Sequence  V
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  V
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   348
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions