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| Job Description | Q9N6D8 | | Confidence | 5.00% | Date | Wed Feb 13 11:38:56 GMT 2013 |
| Rank | 71 | Aligned Residues | 35 |
| % Identity | 17% | Template | c2aivA_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:fragment of nucleoporin nup116/nsp116; |
PDBTitle: multiple conformations in the ligand-binding site of the2 yeast nuclear pore targeting domain of nup116p
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| Resolution | UNK |
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50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
G | L | N | S | G | N | L | M | Q | F | S | Q | Q | S | V | L | R | E | M | M | L | Q | D | I | Q | . |
I | Q | A | N | T | L | P | K | L | E | N | H | N | I | G | G | Y | C | F |
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| Template Conservation |   |
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| Template Sequence |   |
G | P | N | E | N | Y | Y | I | . |
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S | P | S | L | D | T | L | S | S | Y | S | L | L | Q | L | R | K | V | P | H | L | V | V | G | H | K | S | Y |
| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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