Return to main results Retrieve Phyre Job Id

Job DescriptionQ9N6D8
Confidence100.00%DateWed Feb 13 11:38:56 GMT 2013
Rank1Aligned Residues195
% Identity27%Templatec2xipA_
PDB info PDB header:cell cycleChain: A: PDB Molecule:tumour protein p73; PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100... ......110.........120.........130.........140...... ...150.
Predicted Secondary structure 



















...












..

Query SS confidence 


























. . .










































. .




Query Sequence  ANTLPKLENHNIGGYCFSMVLDEPPKS. . . LWMYSIPLNKLYIRMNKAFNVDVQFKSKMPIQPLNLRVFLCFS. . NDVSA
Query Conservation      
  
    
 
 
 
  


 

...




  







 
 


 
      

    



 


..


 
Alig confidence 









.















...
























.
















..




Template Conservation   
  

   
.

 
 
 
        

   


  
 



 
   


 
  .   

 
  

   

   
    
Template Sequence  APVIPSNTDY. PGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKV. STPPPPGTAIRAMPVYKKAEHVTD
Template Known Secondary structure 








B.
TTTT






STT
STTTT
TTS
.SS


TT

STTTTTS
Template Predicted Secondary structure 









.




















.












Template SS confidence 















































































   112.......120. ........130.........140.........150.........160..... ....170.........180.........
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  PVVRCQNHLSVEPLTANNAKMRESLLRSENPNSVYCGNAQGKGISERFSVVVPLNMSRSVTRSGLTRQTLAFKFVCQNSC
Query Conservation 

 

 

   
           






  
 
 

  

    








 
    
 
    

 
 


 


Alig confidence 







































...













....


















Template Conservation   
 

  
    
          
 

      
 
    ... 
 
 

 

   
....
 
    
    


 


Template Sequence  VVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP. . . VTGRQSVVVPYEPP. . . . QVGTEFTTILYNFMCNSSC
Template Known Secondary structure  B



SSTTTTT

S
TT
SS
TT

T...TT





....STT



S
GGG
Template Predicted Secondary structure 

























...






....







Template SS confidence 















































































   190.........200.........210.........220......... 230.........240... ......250.........260..
 
   232.......240.........250.........260.........270.........280
Predicted Secondary structure 

















Query SS confidence 
















































Query Sequence  IGRKETSLVFCLEKACGDIVGQHVIHVKICTCPKRDRIQDERQLNSKKR
Query Conservation 





 





   
 


















  


    


Alig confidence 
















































Template Conservation    



 





   
 



  
 






 


  

        
Template Sequence  VGRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREAEN
Template Known Secondary structure 





TTS

S
T
Template Predicted Secondary structure 














Template SS confidence 
















































   263......270.........280.........290.........300.........310.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions