Return to main results Retrieve Phyre Job Id

Job DescriptionQ9N6D8
Confidence9.78%DateWed Feb 13 11:38:56 GMT 2013
Rank29Aligned Residues26
% Identity19%Templatec1svcP_
PDB info PDB header:transcription/dnaChain: P: PDB Molecule:protein (nuclear factor kappa-b (nf-kb)); PDBTitle: nfkb p50 homodimer bound to dna
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230. ........240.........250.
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Query Sequence  VCQNSC. . . . . . . . . . . . . . IGRKETSLVFCLEKACGDIV
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Template Sequence  MDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVW
Template Known Secondary structure  S
STT


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   256...260.........270.........280.........290.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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