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Job DescriptionQ9N6D8
Confidence100.00%DateWed Feb 13 11:38:56 GMT 2013
Rank3Aligned Residues191
% Identity28%Templatec3q06B_
PDB info PDB header:cell cycle/dnaChain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100. ........110.........120.........130.........140...... ...150...
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Query Sequence  TLPKLENHNIGGYCFSMVLDEPP. . . KSLWMYSIPLNKLYIRMNKAFNVDVQFKSKMPIQPLNLRVFLCFS. . NDVSAPV
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Template Sequence  SVPSQKTY. QGSYGFRLGFLHSGTAKSVTCTYSPALNKMFVQLAKTVPVQLYVDST. PPPGTRVRAMAIYKQSQHMTEVV
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   96...100... ......110.........120.........130.........140.........150 .........160.........170...
 
   154.....160.........170.........180 .........190.........200.........210.........220.........230.
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Query Sequence  VRCQNHLSVEPLTANNAKMRESLLRSE. NPNSVYCGNAQGKGISERFSVVVPLNMSRSVTRSGLTRQTLAFKFVCQNSC.
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Template Sequence  RRCPHHERSSD. . SDGLAPPQHLIRVEGNLRAEYLDDPN. . . . TFRHSVVVPYEPP. . . . EVGSDYTTIYFKFMCNSSCM
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   174.....180.... .....190.........200.........210 .........220... ......230.........240...
 
   232.......240.........250.........260.........270.........280..
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Query Sequence  . . IGRKETSLVFCLEKACGDIVGQHVIHVKICTCPKRDRIQDERQLNSKKRKS
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Template Sequence  GGMNRRPILVIITLEDSSGNLLGRDSFEVRVCACPGRDRRTEEENL. RKKKTM
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   244.....250.........260.........270.........280......... 290.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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