Email l.a.kelley@imperial.ac.uk Description A1Z6I9 Date Tue Jan 22 12:00:06 GMT 2013 Unique Job ID e856bc3d2f8076dd

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2xr1B_ 43.6 25 PDB header:hydrolase Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 100 kd PDBTitle: dimeric archaeal cleavage and polyadenylation specificity2 factor with n-terminal kh domains (kh-cpsf) from methanosarcina3 mazei 2 c3af5A_ 41.0 30 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein ph1404; PDBTitle: the crystal structure of an archaeal cpsf subunit, ph1404 from2 pyrococcus horikoshii 3 d1ynha1 40.0 100 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Succinylarginine dihydrolase-like 4 d1v5ka_ 37.4 33 Fold:CH domain-like Superfamily:Calponin-homology domain, CH-domain Family:Calponin-homology domain, CH-domain 5 c2az4A_ 33.2 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ef2904; PDBTitle: crystal structure of a protein of unknown function from enterococcus2 faecalis v583 6 d1ej2a_ 32.3 13 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Adenylyltransferase 7 c2xr1A_ 30.9 25 PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor 100 kd PDBTitle: dimeric archaeal cleavage and polyadenylation specificity2 factor with n-terminal kh domains (kh-cpsf) from methanosarcina3 mazei 8 c1w0pA_ 29.2 75 PDB header:hydrolase Chain: A: PDB Molecule:sialidase; PDBTitle: vibrio cholerae sialidase with alpha-2,6-sialyllactose 9 c1wyoA_ 22.9 28 PDB header:structural protein Chain: A: PDB Molecule:microtubule-associated protein rp/eb family PDBTitle: solution structure of the ch domain of human microtubule-2 associated protein rp/eb family member 3 10 d2qjza1 21.7 32 Fold:CH domain-like Superfamily:Calponin-homology domain, CH-domain Family:Calponin-homology domain, CH-domain 11 c3elkA_ 21.5 23 PDB header:transcription regulator Chain: A: PDB Molecule:putative transcriptional regulator ta0346; PDBTitle: crystal structure of putative transcriptional regulator ta0346 from2 thermoplasma acidophilum 12 c2bibA_ 20.4 53 PDB header:hydrolase Chain: A: PDB Molecule:teichoic acid phosphorylcholine esterase/ choline binding PDBTitle: crystal structure of the complete modular teichioic acid2 phosphorylcholine esterase pce (cbpe) from streptococcus3 pneumoniae 13 c2ycbA_ 20.0 30 PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor; PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus 14 c2e1nA_ 18.5 19 PDB header:circadian clock protein Chain: A: PDB Molecule:pex; PDBTitle: crystal structure of the cyanobacterium circadian clock modifier pex 15 c2dqlA_ 17.8 15 PDB header:circadian clock protein Chain: A: PDB Molecule:pex protein; PDBTitle: crytal structure of the circadian clock associated protein2 pex from anabaena 16 d1jjcb3 16.8 35 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Myf domain 17 c3l7wA_ 15.4 29 PDB header:transcription Chain: A: PDB Molecule:putative uncharacterized protein smu.1704; PDBTitle: the crystal structure of smu.1704 from streptococcus mutans ua159 18 d1ewsa_ 14.9 35 Fold:Defensin-like Superfamily:Defensin-like Family:Defensin 19 c1ewsA_ 14.9 35 PDB header:antimicrobial protein Chain: A: PDB Molecule:rk-1 defensin; PDBTitle: the three-dimensional solution structure of the rabbit2 kidney defensin, rk-1 20 c1tnuL_ 14.6 12 PDB header:transferase Chain: L: PDB Molecule:geranylgeranyl transferase type i beta subunit; PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a gcincckvl peptide derived from rhob 21 d1n4qb_ not modelled 14.6 12 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Protein prenyltransferases 22 d2h6fb1 not modelled 14.5 18 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Protein prenyltransferases 23 d2i7xa1 not modelled 14.3 24 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 24 c2i7xA_ not modelled 14.3 24 PDB header:rna binding protein, protein binding Chain: A: PDB Molecule:protein cft2; PDBTitle: structure of yeast cpsf-100 (ydh1p) 25 c1ztmC_ not modelled 14.1 29 PDB header:viral protein Chain: C: PDB Molecule:fusion glycoprotein; PDBTitle: structure of the uncleaved paramyxovirus (hpiv3) fusion protein 26 d1u7na_ not modelled 14.1 39 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PlsX-like 27 c3aygA_ not modelled 13.8 31 PDB header:oxidoreductase Chain: A: PDB Molecule:nitric oxide reductase; PDBTitle: crystal structure of nitric oxide reductase complex with hqno 28 d2esha1 not modelled 13.4 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PadR-like 29 c2dkxA_ not modelled 13.2 13 PDB header:signaling protein Chain: A: PDB Molecule:sam pointed domain-containing ets transcription PDBTitle: solution structure of the sam_pnt-domain of ets2 transcription factor pdef (prostate ets) 30 d1wraa1 not modelled 12.3 53 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Pce catalytic domain-like 31 c3lq6A_ not modelled 11.8 30 PDB header:viral protein Chain: A: PDB Molecule:capsid protein; PDBTitle: crystal structure of murine norovirus protruding (p) domain 32 d1f9aa_ not modelled 11.6 21 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Adenylyltransferase 33 d2aq0a1 not modelled 10.9 14 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 34 c3oirA_ not modelled 10.9 14 PDB header:transport protein Chain: A: PDB Molecule:sulfate transporter sulfate transporter family protein; PDBTitle: crystal structure of sulfate transporter family protein from wolinella2 succinogenes 35 c2h29A_ not modelled 10.8 30 PDB header:transferase Chain: A: PDB Molecule:probable nicotinate-nucleotide PDBTitle: crystal structure of nicotinic acid mononucleotide2 adenylyltransferase from staphylococcus aureus: product3 bound form 1 36 c3hhhA_ not modelled 10.7 38 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, padr family; PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583 37 d2dkfa1 not modelled 10.4 32 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 38 c2f9jP_ not modelled 10.1 64 PDB header:rna binding protein Chain: P: PDB Molecule:splicing factor 3b subunit 1; PDBTitle: 3.0 angstrom resolution structure of a y22m mutant of the spliceosomal2 protein p14 bound to a region of sf3b155 39 d2cbia3 not modelled 9.8 23 Fold:Zincin-like Superfamily:beta-N-acetylhexosaminidase-like domain Family:Hyaluronidase N-terminal domain-like 40 c2rmsB_ not modelled 9.8 35 PDB header:transcription Chain: B: PDB Molecule:msin3a-binding protein; PDBTitle: solution structure of the msin3a pah1-sap25 sid complex 41 c3ixxE_ not modelled 9.5 33 PDB header:virus Chain: E: PDB Molecule:peptide pr; PDBTitle: the pseudo-atomic structure of west nile immature virus in2 complex with fab fragments of the anti-fusion loop antibody3 e53 42 c3f8fA_ not modelled 9.5 25 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, padr-like family; PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin 43 d2co5a1 not modelled 9.2 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:F93-like 44 c2p7vA_ not modelled 9.1 23 PDB header:transcription Chain: A: PDB Molecule:regulator of sigma d; PDBTitle: crystal structure of the escherichia coli regulator of sigma 70, rsd,2 in complex with sigma 70 domain 4 45 c3hkzZ_ not modelled 9.1 33 PDB header:transferase Chain: Z: PDB Molecule:dna-directed rna polymerase subunit 13; PDBTitle: the x-ray crystal structure of rna polymerase from archaea 46 d1xzpa3 not modelled 9.1 64 Fold:Folate-binding domain Superfamily:Folate-binding domain Family:TrmE formyl-THF-binding domain 47 c1xzqB_ not modelled 9.1 64 PDB header:hydrolase Chain: B: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf 48 d1hcra_ not modelled 8.7 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 49 d1ijwc_ not modelled 8.6 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 50 c3kzwD_ not modelled 8.6 62 PDB header:hydrolase Chain: D: PDB Molecule:cytosol aminopeptidase; PDBTitle: crystal structure of cytosol aminopeptidase from staphylococcus aureus2 col 51 d1uptb_ not modelled 8.6 35 Fold:GRIP domain Superfamily:GRIP domain Family:GRIP domain 52 d2i9wa3 not modelled 8.5 55 Fold:Sec-C motif Superfamily:Sec-C motif Family:Sec-C motif 53 d1uptd_ not modelled 8.2 35 Fold:GRIP domain Superfamily:GRIP domain Family:GRIP domain 54 c3ut2B_ not modelled 8.1 15 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase-peroxidase 2; PDBTitle: crystal structure of fungal magkatg2 55 c3tsjA_ not modelled 8.0 18 PDB header:allergen, oxidoreductase Chain: A: PDB Molecule:pollen allergen phl p 4; PDBTitle: crystal structure of phl p 4, a grass pollen allergen with glucose2 dehydrogenase activity 56 d1mg7a1 not modelled 7.9 60 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Early switch protein XOL-1, N-terminal domain 57 d3dssb1 not modelled 7.9 19 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Protein prenyltransferases 58 c3c6rE_ not modelled 7.7 42 PDB header:virus Chain: E: PDB Molecule:peptide pr; PDBTitle: low ph immature dengue virus 59 d1sv0a_ not modelled 7.7 18 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Pointed domain 60 c3lvtA_ not modelled 7.7 27 PDB header:hydrolase Chain: A: PDB Molecule:glycosyl hydrolase, family 38; PDBTitle: the crystal structure of a protein in the glycosyl hydrolase2 family 38 from enterococcus faecalis to 2.55a 61 c2wyhA_ not modelled 7.7 33 PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase; PDBTitle: structure of the streptococcus pyogenes family gh38 alpha-2 mannosidase 62 c3peiA_ not modelled 7.6 62 PDB header:hydrolase Chain: A: PDB Molecule:cytosol aminopeptidase; PDBTitle: crystal structure of cytosol aminopeptidase from francisella2 tularensis 63 c3c6eC_ not modelled 7.6 42 PDB header:viral protein Chain: C: PDB Molecule:prm; PDBTitle: crystal structure of the precursor membrane protein- envelope protein2 heterodimer from the dengue 2 virus at neutral ph 64 c3ij3A_ not modelled 7.6 54 PDB header:hydrolase Chain: A: PDB Molecule:cytosol aminopeptidase; PDBTitle: 1.8 angstrom resolution crystal structure of cytosol aminopeptidase2 from coxiella burnetii 65 c2e8pA_ not modelled 7.4 22 PDB header:signaling protein Chain: A: PDB Molecule:elf3 protein; PDBTitle: solution structure of the n-terminal sam-domain of e74-like2 factor 3 66 c3bk2A_ not modelled 7.3 22 PDB header:hydrolase Chain: A: PDB Molecule:metal dependent hydrolase; PDBTitle: crystal structure analysis of the rnase j/ump complex 67 d2c1ia2 not modelled 7.3 18 Fold:Peptidoglycan deacetylase N-terminal noncatalytic region Superfamily:Peptidoglycan deacetylase N-terminal noncatalytic region Family:Peptidoglycan deacetylase N-terminal noncatalytic region 68 c3pqhB_ not modelled 7.3 23 PDB header:viral protein Chain: B: PDB Molecule:gene product 138; PDBTitle: crystal structure of the c-terminal fragment of the bacteriophage2 phi92 membrane-piercing protein gp138 69 c4efdF_ not modelled 7.3 54 PDB header:hydrolase Chain: F: PDB Molecule:aminopeptidase; PDBTitle: crystal structure of an m17 aminopeptidase from trypanosoma brucei,2 tb427tmp.02.4440 70 c3e37B_ not modelled 7.2 18 PDB header:transferase Chain: B: PDB Molecule:protein farnesyltransferase subunit beta; PDBTitle: protein farnesyltransferase complexed with bisubstrate2 ethylenediamine scaffold inhibitor 5 71 c4b1oQ_ not modelled 7.1 27 PDB header:transferase/dna Chain: Q: PDB Molecule:rna polymerase subunit 13; PDBTitle: archaeal rnap-dna binary complex at 4.32ang 72 c4esfA_ not modelled 7.1 38 PDB header:transcription Chain: A: PDB Molecule:padr-like transcriptional regulator; PDBTitle: crystal structure of padr-like transcriptional regulator (bce3449)2 from bacillus cereus strain atcc 10987 73 c3h8gC_ not modelled 7.1 62 PDB header:hydrolase Chain: C: PDB Molecule:cytosol aminopeptidase; PDBTitle: bestatin complex structure of leucine aminopeptidase from pseudomonas2 putida 74 d1mtxa_ not modelled 7.1 100 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Short-chain scorpion toxins 75 c3hkzY_ not modelled 7.0 33 PDB header:transferase Chain: Y: PDB Molecule:dna-directed rna polymerase subunit 13; PDBTitle: the x-ray crystal structure of rna polymerase from archaea 76 d1xmaa_ not modelled 6.9 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PadR-like 77 c1xmaA_ not modelled 6.9 18 PDB header:transcription Chain: A: PDB Molecule:predicted transcriptional regulator; PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833 78 d1qwga_ not modelled 6.9 28 Fold:TIM beta/alpha-barrel Superfamily:(2r)-phospho-3-sulfolactate synthase ComA Family:(2r)-phospho-3-sulfolactate synthase ComA 79 c4aclA_ not modelled 6.8 12 PDB header:protein transport Chain: A: PDB Molecule:tssl; PDBTitle: 3d structure of dotu from francisella novicida 80 d1h2tc3 not modelled 6.8 28 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:MIF4G domain-like 81 d2o5aa1 not modelled 6.8 26 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Iojap/YbeB-like 82 c2waqQ_ not modelled 6.8 27 PDB header:transcription Chain: Q: PDB Molecule:dna-directed rna polymerase rpo13 subunit; PDBTitle: the complete structure of the archaeal 13-subunit dna-2 directed rna polymerase 83 c4esbA_ not modelled 6.7 27 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, padr family; PDBTitle: crystal structure of padr-like transcriptional regulator (bc4206) from2 bacillus cereus strain atcc 14579 84 d2nxya1 not modelled 6.6 19 Fold:gp120 core Superfamily:gp120 core Family:gp120 core 85 c3ri2B_ not modelled 6.5 22 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, padr-like family; PDBTitle: crystal structure of padr family transcriptional regulator from2 eggerthella lenta dsm 2243 86 c3pcoD_ not modelled 6.5 29 PDB header:ligase Chain: D: PDB Molecule:phenylalanyl-trna synthetase, beta chain; PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp 87 c2qjxA_ not modelled 6.4 23 PDB header:protein binding Chain: A: PDB Molecule:protein bim1; PDBTitle: structural basis of microtubule plus end tracking by2 xmap215, clip-170 and eb1 88 c2kzhA_ not modelled 6.4 36 PDB header:isomerase Chain: A: PDB Molecule:tryptophan biosynthesis protein trpcf; PDBTitle: three-dimensional structure of a truncated phosphoribosylanthranilate2 isomerase (residues 255-384) from escherichia coli 89 c4aboI_ not modelled 6.4 23 PDB header:structural protein Chain: I: PDB Molecule:microtubule integrity protein mal3; PDBTitle: mal3 ch domain homology model and mammalian tubulin (2xrp) docked2 into the 8.6-angstrom cryo-em map of mal3-gtpgammas-microtubules 90 c2p28A_ not modelled 6.4 43 PDB header:cell adhesion Chain: A: PDB Molecule:integrin beta-2; PDBTitle: structure of the phe2 and phe3 fragments of the integrin beta2 subunit 91 c2kvsA_ not modelled 6.4 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mw0776; PDBTitle: nmr solution structure of q7a1e8 protein from staphylococcus2 aureus: northeast structural genomics consortium target:3 zr215 92 d1hcfa_ not modelled 6.4 13 Fold:Cystine-knot cytokines Superfamily:Cystine-knot cytokines Family:Neurotrophin 93 c3kihC_ not modelled 6.4 29 PDB header:sugar binding protein Chain: C: PDB Molecule:5-bladed -propeller lectin; PDBTitle: the crystal structures of two fragments truncated from 5-bladed -2 propeller lectin, tachylectin-2 (lib2-d2-15) 94 d1sxma_ not modelled 6.3 100 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Short-chain scorpion toxins 95 c3qq5A_ not modelled 6.2 60 PDB header:oxidoreductase Chain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf 96 d1ok8a1 not modelled 6.2 27 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain 97 c4arpB_ not modelled 6.1 35 PDB header:hydrolase Chain: B: PDB Molecule:pesticin; PDBTitle: structure of the inactive pesticin e178a mutant 98 c2hc9A_ not modelled 6.1 69 PDB header:hydrolase Chain: A: PDB Molecule:leucine aminopeptidase 1; PDBTitle: structure of caenorhabditis elegans leucine aminopeptidase-zinc2 complex (lap1) 99 d1pjwa_ not modelled 6.0 31 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Class II viral fusion proteins C-terminal domain