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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank3Aligned Residues530
% Identity27%Templatec2q9oA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:laccase-1; PDBTitle: near-atomic resolution structure of a melanocarpus albomyces laccase
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.........190.........200.........210.........220.........230.. .......240.........
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Query Sequence  NPALSAPDECARACREGEPPRICYYHFTLEYYTVLGAACQVCTPNATNTVWSHCQCVLADGV. ERGILTANRMIPGPSIQ
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Template Sequence  EPTCNTP. . SNRACWSDGFDINTDYEVSTPDTGVTQSY. . . . VFNLTEVDN. . . . WMGPDGVVKEKVMLINGNIMGPNIV
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SS
BT..TB
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   1...... ..10.........20.........30...... ...40..... ....50.........60.........70
 
   250.........260.........270.........280.........290....... ..300....... ..310.........320.......
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Query Sequence  VCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQ. GNTFRYQWTG. NAGTHFWHAHTGLQKLDGLY
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Template Sequence  ANWGDTVEVTVINNLVTNGTSIHWHGI. QKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVV
Template Known Secondary structure  TT

SS

B
T
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TT
GGGS

BTTTB

B
TTT

S

STTGGGGT
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   71........80.........90....... ..100.........110.........120.........130.........140.........
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  GSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQDPESMLINGKGQFRDPNTGFMTNTPLEIF
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Template Sequence  GTIQINGPASLP. . . . . . . YDIDLGVFPITDYYYRAADDLVHFTQNNAP. PFSDNVLINGTAVNPNT. . . . . GEGQYANV
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BSTTB
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   151........160.. .......170.........180.........190.. .......200......... 210.......
 
   408.410.........420.........430.........440.........450.........460.........470.........480.......
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Query Sequence  TITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGEC
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Template Sequence  TLTPGKRHRLRILNTSTE. NHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQA
Template Known Secondary structure 
TT


SS.

TTB
TTS

TT


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   218.220.........230..... ....240.........250.........260.........270.........280.........290......
 
   488 .490.........500.........510.........520.........530.........540.........550.........560....
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Query Sequence  G. . . IRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICDRKRADAVCVSNLKNAKKVDKGVLVERPDVKIF
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Template Sequence  ACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDV. . . . . . . . . . . . . . . . RPVVPRSVPVNSFVKRPDNTLP
Template Known Secondary structure  TT

BSSS

TTS

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TT


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BSS

B


TT



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   297..300.........310.........320.........330........ .340.........350.........360
 
   565....570.........580.........590.........600.........610.........620.........630.........640....
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Query Sequence  LPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPLSQIDDIPPEYFCNGDNRPPNCGPNCECTHMVD
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Template Sequence  VALDLTG. . . . . . . . . . . . . . . . . . . . TPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNI. . . . . . . . . . . . VQV
Template Known Secondary structure 
SS....................SSS
TTB




TTS
T




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   361...... ..370.........380.........390.........400..... ...
 
   645....650........ .660.........670.........680.........690.........700.........710.........720...
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Query Sequence  IPLGAIVEVVLVDE. VQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALELDQMGMLERHFSKPPLKDTIAVPNN
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Template Sequence  DAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAA. . . . SQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG
Template Known Secondary structure 

SS

TTSS



SSS
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TT....S






GGG


BS

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TT
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   409410.........420.........430.........440.........450.. .......460.........470.........480....
 
   724.....730.........740.........750.........760.. .......770.......
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Query Sequence  GYVVIRFRADNPGYWLFHCHFLFHIVIGMNLIFHIGTTA. . . . . DLPPVPPRFPTCGDH
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Template Sequence  GWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVCDEW
Template Known Secondary structure  S

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TT

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   485....490.........500.........510.........520.........530.........540...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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