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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank12Aligned Residues406
% Identity23%Templatec2xu9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:laccase; PDBTitle: crystal structure of laccase from thermus thermophilus hb27
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270.........280.........290.........300....
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Query Sequence  QCVLADGVERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQ
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Template Sequence  TPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLP. EPTNLHWHGLPI. . SPKVDDP. . . . FLEIPPGESWTYE
Template Known Secondary structure  TTTTBSS


TT

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TTTS
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   4950.........60.........70.........80......... 90.........100. ....... .110.........120.
 
   305.. . .310....... ..320.........330.........340.........350.........360.........370.......
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Query Sequence  WTG. N. . AGTHFWHAH. . . . TGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTG
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Template Sequence  FTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPEL. . . . REAEEHLLVLKDLALQGGRPAPHTPMDWMNG
Template Known Secondary structure 

SS




TTSTT



GGGGS....TS
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   122.......130.........140.........150.........160...... ...170.........180.........190.......
 
   378.380.........390.........400.........410.........420.........430.........440........ .450......
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Query Sequence  QDPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDGEPV. HPVDVNTI
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Template Sequence  KEGDLVLVNGA. . . . . . . . . . . . . . . LRPTLVAQKATLRLRLLNASNA. RYYRLALQDHPLYLIAADGGFLEEPLEVSEL
Template Known Secondary structure 


STT...............S

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   198.200........ .210.........220.........230 .........240.........250.........260.
 
   457..460.........470.........480.........490.........500.........510.........520.........530......
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Query Sequence  ISFSGERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICDRKRA
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Template Sequence  LLAPGERAEVLVRLRKE. GRFLLQALPYDRGAMGMMDMGGMAHA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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TT


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   262.......270........ .280.........290.........300....
 
   537..540.........550.........560.........570.........580.........590.........600.........610......
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Query Sequence  DAVCVSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPLSQID
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Template Sequence  . . . . . . MPQGPSRPETLLYLIAPKNPKPLPLPKALSPFPTLPAPVVTRRLVLTEDMMAARFFINGQVFDHRRVD. . . . . .
Template Known Secondary structure  ......

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SGGGTTTB


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   305....310.........320.........330.........340.........350.........360.........370..
 
   617..620.........630.........640.........650.........660.........670.........680.........690......
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Query Sequence  DIPPEYFCNGDNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . LKGQAQTVEVWEVENQGD. . . MDHPFHLHVHPFQVLSVGGRPF. . . . . . . . . . .
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TT

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SS

BTT
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   373......380.........390 .........400.........410..
 
   697..700.........710.........720.........730.........740.........750.........
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Query Sequence  LELDQMGMLERHFSKPPLKDTIAVPNNGYVVIRFRADNPGYWLFHCHFLFHIVIGMNLIFHIG
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Template Sequence  . . . . . . . . . . . . . PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG
Template Known Secondary structure  .............SS


BS
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   413......420.........430.........440.........450.........460..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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