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Job Description | B7YZT1 | Confidence | 96.89% | Date | Tue Jan 22 11:31:19 GMT 2013 |
Rank | 127 | Aligned Residues | 73 |
% Identity | 19% | Template | c1xmeB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; |
PDBTitle: structure of recombinant cytochrome ba3 oxidase from thermus2 thermophilus
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Resolution | 2.30 Å |
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641 | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | M | V | D | I | P | L | G | A | I | V | E | V | V | L | V | D | E | V | Q | Q | V | N | L | S | H | P | F | H | L | H | G | T | A | F | Y | V | V | G | L | G | R | S | P | D | K | S | I | K | K | I | N | L | K | H | A | L | E | L | D | Q | M | G | M | L | E | R | H | F | S | K | P | P | L | K | D | T | I | A | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | P | I | E | V | P | Q | G | A | E | I | V | F | K | I | T | S | P | D | V | I | . |
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E | G | T | N | I | N | V | E | V |
Template Known Secondary structure |   |
S | S |  |  |  |  | T | T | S |  |  |  |  |  |  |  | B | S | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
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. | 120 | . | . | . | . | . | . | . |
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721 | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | N | N | G | Y | V | V | I | R | F | R | A | D | N | P | G | Y | W | L | F | H | C | H | F | . |
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L | F | H | I | V | I | G | M | N | L | I | F | H | I | G | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | P | G | E | V | S | T | V | R | Y | T | F | K | R | P | G | E | Y | R | I | I | C | N | Q | Y | C | G | L | G | H | . |
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Q | N | M | F | G | T | I | V | V | K | E |
Template Known Secondary structure |   |
| B | T | B |
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| S | T | T | G | . | . | G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
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. | . | 160 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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