Job Description B7YZT1 Confidence 89.38% Date Tue Jan 22 11:31:19 GMT 2013
Rank 142 Aligned Residues 60
% Identity 22% Template c1ar1B_
PDB info
PDB header: complex (oxidoreductase/antibody)Chain: B: PDB Molecule: cytochrome c oxidase;
PDBTitle: structure at 2.7 angstrom resolution of the paracoccus2 denitrificans two-subunit cytochrome c oxidase complexed3 with an antibody fv fragment
Resolution 2.70 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
638 . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700 . . . . . . . . . 710 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E C T H M V D I P L G A I V E V V L V D E V Q Q V N L S H P F H L H G T A F Y V V G L G R S P D K S I K K I N L K H A L E L D Q M G M L E R H F S K P P L K D T
Query Conservation  
                                                                                             
Alig confidence  
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Template Conservation  
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Template Sequence  
A T D N P V V V P V G K K V L V Q V T A T D V I .
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H A W T I .
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P A F A V K
Template Known Secondary structure  
B S S T T S S S S . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G G G T
Template Predicted Secondary structure  
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Template SS confidence  
   
157 . . 160 . . . . . . . . . 170 . . . . . . . . . 180
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718 . 720 . . . . . . . . . 730 . . . . . . . . . 740 . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
I A V P N N G Y V V I R F R A D N P G Y W L F H C
Query Conservation  
       
Alig confidence  
Template Conservation  
                               
Template Sequence  
Q D A V P G R I A Q L W F S V D Q E G V Y F G Q C
Template Known Secondary structure  
T T S S S
Template Predicted Secondary structure  
Template SS confidence  
   
192 . . . . . . . 200 . . . . . . . . . 210 . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]