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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank10Aligned Residues424
% Identity24%Templatec2fqeA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:blue copper oxidase cueo; PDBTitle: crystal structures of e. coli laccase cueo under different2 copper binding situations
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270.........280.........290.........300....
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Query Sequence  QCVLADGVERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQ
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Template Sequence  GQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT. EETTLHWHGLEV. . PGEVDGGP. . . QGIIPPGGKRSVT
Template Known Secondary structure  TTSSSSB

TT

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GGGT

T...T

B
TT
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   55....60.........70.........80.........90..... ....100....... ..110..... ....120........
 
   305.. . .310....... ..320.........330.........340.........350.........360...... ...370......
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Query Sequence  WTG. N. AGTHFWHAH. . . . TGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAE. . RYPGRLAVNT
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Template Sequence  LNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKL. MLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAV
Template Known Secondary structure 

S
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TTTT


TTGGGG.




BTTT
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   129130.........140.........150.........160.........170 .........180.........190.........200.......
 
   377..380.........390.........400.........410.........420.........430... ......440........ .450....
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Query Sequence  GQDPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTI. EGHGMTVIATDGEPV. HPVDVN
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Template Sequence  GWFGDTLLTNG. . . . . . . . . . . . . . . AIYPQHAAPRGWLRLRLLNGCNARS. LNFATSDNRPLYVIASDGGLLPEPVKVS
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STT...............S
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TTS
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   208.210........ .220.........230.........240... ......250.........260.........270.
 
   455....460.........470.........480.... .....490.........500.........510.........520.........530..
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Query Sequence  TIISFSGERYDFVISADQPVGAYWIQLRGL. . GECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICD
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Template Sequence  ELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD. . . . . . . . . . . . . . . . . . .
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TT

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STTTTSTTTTS

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   272.......280.........290.........300.........310.........320.........330..
 
   533......540.........550.........560.........570.........580.........590.........600.........610..
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Query Sequence  RKRADAVCVSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPL
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Template Sequence  . . . . . . . . . . . . TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDFHHANKINGQAFDMNKPM. .
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TT

GGGGGTT

GGG
TTB


TT

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   333......340.........350.........360.........370.........380.........390........
 
   613......620.........630.........640.........650.........660.........670.........680.........690..
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Query Sequence  SQIDDIPPEYFCNGDNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKIN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FAAAKGQYERWVISGVGD. . MMLHPFHIHGTQFRILSENGK. . . . . . . . .
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SSS

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BBTTB.........
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   422.......430......... 440.........450.........460
 
   693......700.........710.........720... ......730...... ...740.........750........
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Query Sequence  LKHALELDQMGMLERHFSKPPLKDTIAVPNN. GYVVIRFRADNPG. . YWLFHCHFLFHIVIGMNLIFHI
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Template Sequence  . . . . . . . . . . . . . PPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV
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GGGSSSBSSSS


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GGG
SSTT

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   461........470.........480.........490.........500.........510......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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