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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank2Aligned Residues511
% Identity29%Templatec3sqrA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:laccase; PDBTitle: crystal structure of laccase from botrytis aclada at 1.67 a resolution
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190......... 200.........210.........220.........230.........240.........250.........260.
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Query Sequence  CREGEPPRICYYHFTL. . EYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCENDKVVIDVE
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Template Sequence  CANSATSRSCWGEYSIDTNWYDVTPTGVTRE. YWLS. . VENS. . TITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVT
Template Known Secondary structure  B

BTTBTTBTTTS
TTT





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SSSB
TTBSS


TT
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   2.......10.........20.........30.. .... ...40 .........50.........60.........70......
 
   262.......270.........280.........290.........300....... ..310.........320.........330.........340
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Query Sequence  NHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWTG. NAGTHFWHAHTGLQKLDGLYGSVVVRQPPSRDP
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Template Sequence  NNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT. . .
Template Known Secondary structure 

SS

B
TT


TT
GGGS

BTTTB

B
TT





STTGGGGT



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   77..80.........90.........100.........110.........120.........130.........140.........150...
 
   341........350.........360.........370.........380.........390... ......400.........410.......
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Query Sequence  NSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQDPESMLINGKGQFRD. . . PNTGFMTNTPLEIFTITPGRRYRF
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Template Sequence  . . . . ADYDEDVGVIFLQDWAHESVFEIWDTARLGA. PPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRL
Template Known Secondary structure  ....S

S
SS
TTS
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BSTTB




TT


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TT
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   154.....160.........170.........180.... .....190.........200.........210.........220........
 
   418.420.........430.........440.........450.........460.........470.........480........ .490.....
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Query Sequence  RMINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECG. . IRRAQQL
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Template Sequence  RLINVGIDSH. FEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANAT
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SS

.TT

TTSS
TT


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BTTGGG
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   229230........ .240.........250.........260.........270.........280.........290.........300.......
 
   496...500.........510.........520.........530.........540.........550.........560.........570.....
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Query Sequence  AILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICDRKRADAVCVSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYEPK
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Template Sequence  GILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSAF. . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSTT














S

S
GGG

BSS

B

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   308.310.........320.........330.........340.........350.........360.
 
   576...580.........590.........600.........610.........620.........630.........640.........650.....
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Query Sequence  ALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPLSQIDDIPPEYFCNGDNRPPNCGPNCECTHMVDIPLGAIVEVVL
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Template Sequence  . . . . . . . . . . . . . . . . TNYFTWTINSSSLLLDWSSPTTLK. . . . . . . . . . . . . IFNNETIFPTEYNVVALEQEEWVVYVI
Template Known Secondary structure  ................SSSTTB




TTS
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GGG




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   362.......370.........380..... ....390.........400.........410..
 
   656...660.........670.........680.........690.........700.........710.........720.........730.....
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Query Sequence  VDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALELDQMGMLERHFSKPPLKDTIAVPNNGYVVIRFRADNP
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Template Sequence  EDLT. GFGIWHPIHLHGHDFFIVAQETDVFNSDES. . . . . . . . . . . . . PAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP
Template Known Secondary structure 
S.SS


SS

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TTTS.............GGG


BS

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TTSS
S
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   417..420 .........430.........440.........450 .........460.........470.........480..
 
   736...740.........750.........760.. .......770.......
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Query Sequence  GYWLFHCHFLFHIVIGMNLIFHIGTTA. . . DLPPVPPRFPTCGDH
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Template Sequence  GSWLLHCHIAWHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANW
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STT
SGGG



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   483......490.........500.........510.........520.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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