 |
Job Description | B7YZT1 | Confidence | 99.92% | Date | Tue Jan 22 11:31:19 GMT 2013 |
Rank | 68 | Aligned Residues | 96 |
% Identity | 22% | Template | d2j5wa3 |
SCOP info | Cupredoxin-like
| Cupredoxins
| Multidomain cupredoxins
|
Resolution | 2.80 |
|
 |
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | |
. | . | 310 | |
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
| . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
I | P | G | P | S | I | Q | V | C | E | N | D | K | V | V | I | D | V | E | N | H | M | E | G | M | E | V | T | I | H | W | H | G | I | W | Q | R | G | S | Q | Y | Y | D | G | V | P | F | . |
. |
. |
. |
. |
V | T | Q | C | P | I | Q | Q | G | N | T | F | R | Y | Q | W | T | G | . |
N | A | G | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|
|
|   |
|   |
|   |   |
|
|   |
|   |
|   |
|   |
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|
|
|
|   | . | . | . | . | . |
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |
|   |
| . |
|   |
| . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |
|
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |
|   |
|   |   |   | . |   |
|   |
|
|
|   |
|
|
|   |   | . | . |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|   |
|   |   |   |   |
|
|   |   |   |
|
Template Sequence |   |
I | L | G | P | V | I | W | A | E | V | G | D | T | I | R | V | T | F | H | N | K | G | A | . |
Y | P | L | S | I | E | P | I | G | V | R | F | . |
. |
N | K | N | N | E | G | T | Y | Y | S | P | N | V | P | P | S | A | S | H | V | A | P | T | E | T | F | T | Y | E | W | T | V | P | K | E | V | G | P | T | N | A | D |
Template Known Secondary structure |   |
T | S |
|
|
|  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| S | S | . | S |
| B |
|
|  |  |  | S | S | B |
| . | . |
| G | G | G |
| S | B |
|
|
|
|
|
|
|
|
| S | S |
| B |
| T | T |
|  |  |  |  |  |  |  |
|
| G | G | G | S |
|
| S | S | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
429 | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | |
. | . | . | . | . | . | . | . | 460 | . | . | . | |
|
. | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . |
  |
  |   |
|
|
|
|
311 | . | . | . | . | . | . | . | . | 320 | . | . | |
|
. | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  | . | . |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
T | H | F | W | H | A | H | T | G | L | Q | K | . |
. |
L | D | G | L | Y | G | S | V | V | V | R | Q | P | P | S | R | D | P | N |
Query Conservation |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|   |
|   | . | . |   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|
|
|
|
|   |   |   |   |
|   |   |
|
|
|   |
|   |
|
|
|   |   |   |
|   |
|   |   |   |
Template Sequence |   |
P | V | C | L | A | K | M | Y | Y | S | A | V | D | P | T | K | D | I | F | T | G | L | I | G | P | M | K | I | C | K | K | G | S | L | H | A | N |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |
| B | S | S |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |
| T | T |
| B |
| T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
513 | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|