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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank1Aligned Residues528
% Identity25%Templatec3ppsD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:laccase; PDBTitle: crystal structure of an ascomycete fungal laccase from thielavia2 arenaria
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   172.......180.........190.........200.........210.........220.........230..... ....240.........250
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Query Sequence  PALSAPDECARACREGEPPRICYYHFTLEYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERG. ILTANRMIPGPSIQV
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Template Sequence  PTCNTP. . SNRACWTNGFDINTDYE. . VSTPNTGRTVAYQL. . . . TLTEKEN. . WIGPDGVLKNVVMLVNDKIIGPTIRA
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SS

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STTSSS
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   3..... .10.........20..... ....30......... 40...... ...50.........60.........70..
 
   251........260.........270.........280.........290....... ..300....... ..310.........320........
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Query Sequence  CENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQ. GNTFRYQWTG. NAGTHFWHAHTGLQKLDGLYG
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Template Sequence  NWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVG
Template Known Secondary structure  TT


SS



T


TT
GGGS

BTTTB



STT




STTGGGGT
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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   329330.........340.........350.........360.........370.........380.........390.........400........
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Query Sequence  SVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQDPESMLINGKGQFRDPNTGFMTNTPLEIFT
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Template Sequence  TIQIDGPASLP. . . . . . . YDIDLGVFPLMDYYYRSADELVHFTQSNGA. PPSDNVLFNGTARHPET. . . . . GAGQWYNVT
Template Known Secondary structure 


SS
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SS
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   153......160... ......170.........180.........190... ......200.........210 .........
 
   409410.........420.........430.........440.........450.........460.........470.........480........
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Query Sequence  ITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECG
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Template Sequence  LTPGKRHRLRIINTSTD. NHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLC
Template Known Secondary structure 
TT


SS.

TTB
TTS
TT


S
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   220.........230...... ...240.........250.........260.........270.........280.........290........
 
   489490.........500.........510.........520.........530.........540.........550.........560......
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Query Sequence  . . IRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICDRKRADAVCVSNLKNAKKVDKGVLVERPDVKIFLP
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Template Sequence  GSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVNNFVKRPSNTLG. . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

BS
SS
TT

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TT






BSS

B


TT



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   299300.........310.........320.........330.........340.........350.........360
 
   567..570.........580.........590.........600.........610.........620.........630.........640......
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Query Sequence  FRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPLSQIDDIPPEYFCNGDNRPPNCGPNCECTHMVDIP
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Template Sequence  . . . . . . . . . . . . . . . . . . VTLDIGGTPLFVWKVNGSAINVDWGKPILDY. . . . . . . . . . . . . VMSGNTSYPVSDNIVQVD
Template Known Secondary structure  ..................SSSSSTTB




SSS
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   361........370.........380.........390. ........400.........
 
   647..650........ .660.........670.........680.........690.........700.........710.........720...
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Query Sequence  LGAIVEVVLVDE. . . VQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALELDQMGMLERHFSKPPLKDTIAVPNN
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Template Sequence  AVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPS. . . . AGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAG
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SS

TT
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SS

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GG....G






TTT


BS

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   410.........420.........430.........440.........450... ......460.........470.........480.....
 
   724.....730.........740.........750.........760.........770... ....
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Query Sequence  GYVVIRFRADNPGYWLFHCHFLFHIVIGMNLIFHIGTTADLPPVPPRFPT. . . . . . . . . . CGDH
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Template Sequence  GWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDF. LERPNDLRTQLNSNAKRADRDDFNRVCREW
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   486...490.........500.........510........ .520.........530.........540........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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