 |
Job Description | B7YZT1 | Confidence | 98.34% | Date | Tue Jan 22 11:31:19 GMT 2013 |
Rank | 99 | Aligned Residues | 102 |
% Identity | 13% | Template | d1oe1a2 |
SCOP info | Cupredoxin-like
| Cupredoxins
| Multidomain cupredoxins
|
Resolution | 1.04 |
|
 |
  |   |
641 | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | M | V | D | I | P | L | G | A | I | V | E | V | V | L | V | D | E | V | Q | Q | V | N | L | S | H | P | F | H | L | H | G | T | A | F | Y | V | V | G | L | G | R | S | P | D | K | S | I | K | K | I | N | L | K | H | A | L | E | L | D | Q | M | G | M | L | E | R | H | F | S | K | P | P | L | K | D | T | I | A | V |
Query Conservation |   |
  |
|
|   |
|   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |
|
| . | . | . | . |
|
|
|
|
|   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |
|
Template Sequence |   |
N | A | L | T | A | K | V | G | E | T | V | L | L | I | H | S | Q | A | N | R | D | T | R | . |
. |
. |
. |
P | H | L | I | G | G | H | G | D | W | V | W | E | T | G | K | F | A | N | P | P | Q | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | E | T | W | F | I |
Template Known Secondary structure |   |
G |
|  |  |  |  | T | T |
|  |  |  |  |  |  |  |  | S | S | S |
| B |
| . | . | . | . |  |  |  | T | T |
|
|  |  |  |  |  | T | T |
|
| T | T | S |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | S | B |
|
| B |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
|
|
|
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
  |
  |   |
721 | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | |
. | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  | . |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | N | G | Y | V | V | I | R | F | R | A | D | N | P | G | Y | W | L | F | H | C | H | F | L | F | H | . |
I | V | I | G | M | N | L | I | F | H | I | G | T | T | A | D | L | P | P | V | P | P | R |
Query Conservation |   |
|
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |
| . |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |
|   |
|
|
|
|   |
|   |
|   |
|   |
|   |   | . |   |   |
|   |   |   |   |
Template Sequence |   |
R | G | G | S | A | G | A | A | L | Y | T | F | K | Q | P | G | V | Y | A | Y | L | N | H | N | L | I | E | A | F | E | L | G | A | A | G | H | I | K | V | E | G | K | W | . |
N | D | D | L | M | K | Q |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  | S | S |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  | S |
|
| . |
| T | T | T |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
278 | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | |
. | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|