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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank16Aligned Residues401
% Identity24%Templatec2yxwB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:blue copper oxidase cueo; PDBTitle: the deletion mutant of multicopper oxidase cueo
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  VLADGVERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWT
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Template Sequence  STFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT. EETTLHWHGLEVP. . GEVDGGP. . . QGIIPPGGKRSVTLN
Template Known Secondary structure  TTSSSSB

TT

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   57..60.........70.........80.........90..... ....100........ .110..... ....120.........130
 
   307. .310....... ..320.........330.........340.........350.........360........ .370........
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Query Sequence  GN. . AGTHFWHAH. . . . TGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERY. . PGRLAVNTGQ
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Template Sequence  VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKL. MLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGW
Template Known Secondary structure 

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BTTT
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   131........140.........150.........160.........170 .........180.........190.........200.........
 
   379380.........390.........400.........410.........420.........430.... .....440........ .450......
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Query Sequence  DPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIE. GHGMTVIATDGEPV. HPVDVNTI
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Template Sequence  FGDTLLTNGA. . . . . . . . . . . . . . . IYPQHAAPRGWLRLRLLNGCNA. RSLNFATSDNRPLYVIASDGGLLPEPVKVSEL
Template Known Secondary structure 

STTB...............SS


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   210......... 220.........230.........240. ........250.........260.........270...
 
   457..460.........470.........480........ .490.........500.........510.........520.........530....
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Query Sequence  ISFSGERYDFVISADQPVGAYWIQLRGLGECG. . IRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICDRK
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Template Sequence  PVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLT. . . . . .
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TT

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   274.....280.........290.........300.........310.........320.........330.........340.......
 
   535....540.........550.........560.........570.........580.........590.........600.........610....
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Query Sequence  RADAVCVSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPLSQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRKLQLSMDGGANKINGQAFDMNKPM. . . .
Template Known Secondary structure  ..................................................TTTTB


TTS
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   348.350.........360.........370...
 
   615....620.........630.........640.........650.........660.........670.........680.........690....
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Query Sequence  IDDIPPEYFCNGDNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . FAAAKGQYERWVISGVGD. . MMLHPFHIHGTQFRILSENGK. . . . . . . . . . .
Template Known Secondary structure  ............................BT


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   422.......430......... 440.........450.........460
 
   695....700.........710.........720... ......730...... ...740.........750.........760..
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Query Sequence  HALELDQMGMLERHFSKPPLKDTIAVPNN. GYVVIRFRADNPG. . YWLFHCHFLFHIVIGMNLIFHIGTTA
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Template Sequence  . . . . . . . . . . . PPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVGHHH
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GGGSSSBSSSS
B
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B
GGG
SSTT



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   461........470.........480.........490.........500.........510.........520
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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