 |
Job Description | B7YZT1 | Confidence | 98.35% | Date | Tue Jan 22 11:31:19 GMT 2013 |
Rank | 98 | Aligned Residues | 81 |
% Identity | 16% | Template | d9pcya_ |
SCOP info | Cupredoxin-like
| Cupredoxins
| Plastocyanin/azurin-like
|
Resolution | UNK |
|
 |
  |   |
246 | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | |
. | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
| . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | S | I | Q | V | C | E | N | D | K | V | V | I | D | V | E | N | H | M | E | G | M | E | V | T | I | H | W | H | G | . |
I | W | Q | R | G | S | Q | Y | Y | D | G | V | P | F | V | T | Q | C | P | I | Q | Q | G | N | T | F | R | Y | Q | W | T | G | N | A | G | T | H | F | W | H | A | H | T | G | L | Q | K | L | D |
Query Conservation |   |
|   |
|   |
|   |   |
|
|   |
|   |
|   |
|   |
|   |
|   |   |
|   |
|
|
|
|
|
|
| . |
|   |
|   |   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|
| . | . |
|
|   |
|   |
|   |   |   | . |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   | . |   |   |
|   |
|   |
|   |
|   |   | . | . |
|   |   |   |
Template Sequence |   |
S | E | F | S | V | P | S | G | E | . |
. |
K | I | V | F | K | N | N | A | G | . |
F | P | H | N | V | V | F | D | E | D | E | I | P | A | G | V | D | A | V | K | I | S | M | P | E | E | E | L | L | N | A | P | G | E | T | Y | V | V | T | L | D | . |
T | K | G | T | Y | S | F | Y | C | S | P | . |
. |
H | Q | G | A |
Template Known Secondary structure |   |
S |  |  |  |  |
| T | T |  | . | . |  |  |  |  |  |  |
| S | S | . |
|
| B |
|
|  |  |
| S | S | S | S |
| T | T | S |
| G | G | G | T | S |
|
| T | T |
|
| B |
| S | T | T |
|  |  |  |  |  |  |
| . | S |
|  |  |  |  |  |  |
| G | G | . | . | G | T | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
. | . | . | . | 80 | . | . | . | . | . | . | |
|
. | . | . | 90 |
  |
  |   |
325 | . | . | . | . | 330 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | Y | G | S | V | V | V |
Query Conservation |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |
|
Template Sequence |   |
G | M | V | G | K | V | T | V |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|