Return to main results Retrieve Phyre Job Id

Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank37Aligned Residues249
% Identity29%Templatec3kw8A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative copper oxidase; PDBTitle: two-domain laccase from streptomyces coelicolor at 2.3 a resolution
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.. .......240.........250.........260.........270.........280.........290.........300.......
Predicted Secondary structure 



.









































Query SS confidence 



.










































































Query Sequence  ADGV. ERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWTG
Query Conservation   

 . 
 
  



 


 
 
  

 
 
 
 
 
  
 







 
  

 




 





 

 



 
 
Alig confidence 



.
































.














..




.

















Template Conservation                 







  

 
 
   
   .   


 

      .. 

  .     
 



 

 
 
Template Sequence  ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMD. VRASLHVHGLDYEIS. . SDGTA. MNKSDVEPGGTRTYTWRT
Template Known Secondary structure  TTS
SSTT

BSS


TT

SS.S
B

SSSB

GG..GS

T.TTT
SB
TT

Template Predicted Secondary structure 






















.





..




.







Template SS confidence 















































































   5960.........70.........80.........90...... ...100.........110. ..... ...120.........130....
 
   308.310.........320.........330.........340.........350.........360.........370.........380......
Predicted Secondary structure  .












































Query SS confidence  .














































































Query Sequence  . NAGTHFWHAHTGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQDPESMLIN
Query Conservation  .
 









 
  


 





 
        


 
  
 






 
               
  






Alig confidence  .



































......









...........................
Template Conservation     

   
               
            ......          ...........................
Template Sequence  HKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRN. . . . . . GLYGPVIVRR. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 



TTS


S

SSSSSTT
......T

...........................
Template Predicted Secondary structure 

































......



...........................
Template SS confidence 















































































   135....140.........150.........160.........170. ........180.
 
   387..390.........400.........410.........420.........430.........440.........450.........460......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  GKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDF
Query Conservation 


                   
  













     





 




 

  


  

 
 
 






Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   467..470.........480.........490.........500.........510.........520.........530.........540......
Predicted Secondary structure 
































































Query SS confidence 















































































Query Sequence  VISADQPVGAYWIQLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICDRKRADAVCVSNLKN
Query Conservation 

 
 
  
 
 

               


 
            
                              
  
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   547..550.........560.........570.........580.........590.........600.........610.........620......
Predicted Secondary structure 




























































Query SS confidence 















































































Query Sequence  AKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPLSQIDDIPPEYFCNG
Query Conservation      
        
                               
      

 

   
  
 
            
 
Alig confidence  ...................................................................












Template Conservation  ...................................................................      
      
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KGDVLPDATHTIV
Template Known Secondary structure  ...................................................................TT



S
Template Predicted Secondary structure  ...................................................................









Template SS confidence 















































































   182.......190....
 
   627..630.........640.........650.........660.........670.........680.........690.........700......
Predicted Secondary structure 




























































Query SS confidence 















































































Query Sequence  DNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALELDQMGMLE
Query Conservation                 

 
  
 





 
        







 
 


 
                  
      
Alig confidence 

































...



























...............
Template Conservation        

        
    

 

  


 
 ...  
 





 
 

  

   
     ...............
Template Sequence  FNDMTINNRKPHTGPDFEATVGDRVEIVMITHGE. . . YYHTFHMHGHRWADNRTGILTGPDDPSR. . . . . . . . . . . . . . .
Template Known Secondary structure  TTTT

TT



TT
SS...

TT

SSSSSS

STT



...............
Template Predicted Secondary structure 



















...
















...............
Template SS confidence 















































































   195....200.........210.........220........ .230.........240.........250......
 
   707..710.........720.........730. ........740.........750.........760......
Predicted Secondary structure 










...

















Query SS confidence 
























. . .


































Query Sequence  RHFSKPPLKDTIAVPNNGYVVIRFR. . . ADNPGYWLFHCHFLFHIVIGMNLIFHIGTTADLPP
Query Conservation   

 


 



 




 




 ...




 







 
   

  

 

      
Alig confidence  .......

















...


































Template Conservation  .......  

  
 

      
       

 
  



  
   

 
   
   
   
Template Sequence  . . . . . . . VIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIP
Template Known Secondary structure  .......S
TT
TTTTT
S
STT

TTS

T
Template Predicted Secondary structure  .......























Template SS confidence 






























































   257..260.........270.........280.........290.........300.........310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions