Return to main results Retrieve Phyre Job Id

Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank24Aligned Residues273
% Identity18%Templatec1kbwA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:major outer membrane protein pan 1; PDBTitle: crystal structure of the soluble domain of ania from2 neisseria gonorrhoeae
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.........220.........230.........240.........250.........260.....
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Query Sequence  EGEPPRICYYHFTLEYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCENDKVVIDVENHME
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Template Sequence  DRDYPAKVRVKMETVEKTM. . . . . . . . . . . . . . . . . . . . . . KMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNP.
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S

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BTT

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   32.......40.........50 .........60.........70.........80........
 
   266...270.........280.........290.........300....... ..310....... ..320.........330.........340.
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Query Sequence  GMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWTG. NAGTHFWHAH. . . TGLQKLDGLYGSVVVRQPPSRDPN
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Template Sequence  . SSTVPHNVDFHAATGQ. . GGGAA. . ATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKV
Template Known Secondary structure  .T
SS
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TT

SG..GGGTT..TT
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TT


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SSTT

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   8990.........100.... ..... 110.........120.........130.........140.........150.........160...
 
   342.......350.........360.........370.... .....380.........390.........400.........410........
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Query Sequence  SHLYDFDLTTHIMLISDWLHEDAAERYPGRLAV. . . NTGQDPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFR
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Template Sequence  D. . . . . . . KEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGA. . . . . . . . . LTGDNALKAKAGETVRMY
Template Known Secondary structure  S.......
BSS
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STTSTTT.........TSGGG
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   164 .....170.........180.........190.........200......... 210.........220.......
 
   419420.........430.........440.........450.........460.........470.........480.........490........
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Query Sequence  MINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAIL
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Template Sequence  VGNGGPNLV. SSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIP. GNYTLVDHSIFRAFNKGA. . LGQL
Template Known Secondary structure  SS

.T

BSGGGSS

SBS
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   228.230...... ...240.........250.........260.........270.........280. ........290......... 300...
 
   499500......
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Query Sequence  RYARGPYQ
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Template Sequence  KVEGAENP
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   304.....310.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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