Return to main results Retrieve Phyre Job Id

Job DescriptionB7YZT1
Confidence97.83%DateTue Jan 22 11:31:19 GMT 2013
Rank109Aligned Residues90
% Identity18%Templatec4f2fA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:cation-transporting atpase, e1-e2 family protein; PDBTitle: crystal structure of the metal binding domain (mbd) of the2 streptococcus pneumoniae d39 cu(i) exporting p-type atpase copa with3 cu(i)
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250.........260... ......270.........280.........290.........300.....
Predicted Secondary structure 















.





























Query SS confidence 




































.









































Query Sequence  VLADGVERGILTANRMIPGPSIQVCENDKVVIDVENH. MEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQW
Query Conservation 
  

  
 
  



 


 
 
  

 
 
 
 
 .
  
 







 
  

 




 





 

 



 
Alig confidence 




































.

















.............










Template Conservation      
   
 
     
 
  
 
  
  
     
 
     
 
          .............
 

   

 
Template Sequence  SLENGIQKIRIQAEKGYHPAHIQLQKGIPAEITFHRATPSNCYKEILFEEEGILEP. . . . . . . . . . . . . IGVDEEKVIRF
Template Known Secondary structure  TTSSSSSTTS




GGGSGGGT.............

TT
Template Predicted Secondary structure 























.............



Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60... ......70....
 
   306.. .310.........320.........330....
Predicted Secondary structure 

.













Query SS confidence 


.

























Query Sequence  TGN. AGTHFWHAHTGLQKLDGLYGSVVVRQ
Query Conservation   

. 









 
  


 





 
Alig confidence 


.











.....








Template Conservation 
   

 
   

   .....  
 
 
 
Template Sequence  TPQELGRHEFSCGMKM. . . . . QKGSYTVVE
Template Known Secondary structure 


S
TTSS.....S
Template Predicted Secondary structure 






.....
Template SS confidence 





























   75....80.........90 .........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions