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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank18Aligned Residues377
% Identity20%Templatec2uxtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein sufi; PDBTitle: sufi protein from escherichia coli
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  ADGVERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWTGN
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Template Sequence  TPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLT. ENVSMTVAGLQV. . PGPLMGGP. . . ARMMSPNADWAPVLPIR
Template Known Secondary structure 
SSSSS

TTSSB

TT

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B
T


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GGGS
SG...GG
B
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   60.........70.........80.........90...... ...100........ .110...... ...120.........130...
 
   309310........ .320.........330.........340.........350.........360.........370.........380..
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Query Sequence  . . AGTHFWHAHT. . . . GLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQDPES
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Template Sequence  QNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGV. DDFPVIIQDKRLDNFGTPEYNEPG. SGGFVGDT
Template Known Secondary structure  S
S

TTTTT

SSS


BTT.T
TTS




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S
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   134.....140.........150.........160.........170......... 180.........190.........200... ......210.
 
   383......390.........400.........410.........420.........430... ......440......... 450.........460
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Query Sequence  MLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTI. EGHGMTVIATDGEPVH. PVDVNTIISFS
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Template Sequence  LLVNGV. . . . . . . . . . . . . . QSPYVEVSRGW. VRLRLLNASNSRR. YQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAP
Template Known Secondary structure  TT..............S

SS.

SS

.TTS


SSSSS
T
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   212..... ..220........ .230.........240. ........250.........260.........270.....
 
   461........470.........480.........490.........500.........510.........520.........530.........540
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Query Sequence  GERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICDRKRADAVC
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Template Sequence  GERREILVDMSNG. DEVSITCSSILVSTLVLT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LRPTGLL
Template Known Secondary structure  T

TT
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   276...280........ .290.........300...... ...310...
 
   541........550.........560.........570.........580.........590.........600.........610.........620
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Query Sequence  VSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPLSQIDDIPP
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Template Sequence  PSLPMRLLPTEIMAGSPIRSRDISLGDDP. . . . . . . . . . . . . . . . . . . . . . . . . . . . GINGQLWDVNRID. . . . . . . . . .
Template Known Secondary structure 



S
SSSS






S
SSS............................SBTTB


TT


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   330.........340.........350........ .360.........370.
 
   621........630.........640.........650.........660.........670.........680.........690.........700
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Query Sequence  EYFCNGDNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALELD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . VTAQQGTWERWTVRADEP. . . . . QAFHIEGVMFQIRNVNGAMPFP. . . . . . . . . . . . .
Template Known Secondary structure  ......................TT
.....TT
TTB


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   376...380.........390... ......400.........410.....
 
   701........710.........720.........730 .........740.........750........
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Query Sequence  QMGMLERHFSKPPLKDTIAVPNNGYVVIRF. . RADNPGYWLFHCHFLFHIVIGMNLIFHI
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Template Sequence  . . . . . . . . . EDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLV
Template Known Secondary structure  .........GGSS
BS

S

BTTB
SSTT
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   416...420.........430.........440.........450.........460......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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