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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank7Aligned Residues476
% Identity31%Templatec3t6vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:laccase; PDBTitle: crystal structure of laccase from steccherinum ochraceum
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   215....220.........230.........240.........250.........260....... ..270.........280.........290
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Query Sequence  NATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCENDKVVIDVENHMEGM. . . . EVTIHWHGIWQRGSQYYDGVPFV
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Template Sequence  PVTDLHIVN. ADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI
Template Known Secondary structure  S.
TTS

TTSSS

TT




GGG
S
B
T


TT
GGGS

BTT
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   5....10... ......20.........30.........40.........50.........60.........70.........80...
 
   291........300...... ...310.........320.........330.........340.........350.........360........
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Query Sequence  TQCPIQQGNTFRYQWT. . GNAGTHFWHAHTGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERY
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Template Sequence  TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANL. . YDVDDDTTIITLADWYHVLAKEMG
Template Known Secondary structure  TB

B
TT

TT


STTGGGGT

TT
TTGGG..
SB
SGGG
SS
GGGS
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   84.....90.........100.........110.........120.........130....... ..140.........150.........160.
 
   369370.........380.........390.........400.........410.........420.........430.........440........
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Query Sequence  PGRLAVNTGQDPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDGEPV
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Template Sequence  . . . . . AGGAITADSTLIDGLGRTHVNV. . . . AAVPLSVITVEVGKRYRMRLVSISCDPN. YDFSIDGHDMTIIETDGVDS
Template Known Secondary structure  .....SSS



STTB

BSSS
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TT


SS

.TT

TT
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   162.......170.........180... ......190.........200.........210. ........220.........230.
 
   449450.........460.........470.........480........ .490.........500.........510.........520.......
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Query Sequence  HPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECG. IRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPL
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Template Sequence  QELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVAS. . . . . . . . . . . . . .
Template Known Secondary structure  SB
TT


S
SSSSSS
S
GGGTTTTS
SS






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   232.......240.........250.........260.........270.........280.........290.......
 
   528.530.........540.........550.........560.........570.........580.........590.........600.......
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Query Sequence  DAICDRKRADAVCVSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISP
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Template Sequence  . . . . . TVHTKCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFACG. . . . . . . . . . . . . . . . . . . . . NFVINGVSFTPP
Template Known Secondary structure  .....SS
SSB

GGG

BSS



SS
SSTT
SS

TT.....................TTB




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   298.300.........310.........320.........330......... 340.........350.
 
   608.610.........620.........630.........640.........650.........660.........670.........680.......
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Query Sequence  PAPPLSQIDDIPPEYFCNGDNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKS
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Template Sequence  TVPVLLQICS. . . . . . . . . . . GANTAADLLPSGSVISLPSNSTIEIALPAGAA. . GGPHPFHLHGHDFAVSESASNS. . .
Template Known Secondary structure  SS
T...........T

SSTTSSSTTS
TT


SS..S


TT


TT

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   352.......360. ........370.........380.........390... ......400.........410.....
 
   688.690.........700.........710.........720.. .......730.........740.........750......... 760....
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Query Sequence  IKKINLKHALELDQMGMLERHFSKPPLKDTIAVPN. NGYVVIRFRADNPGYWLFHCHFLFHIVIGMNLIFHIG. . TTADL
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Template Sequence  . . . . . . . . . . . . . . . . . . TSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASA
Template Known Secondary structure  ..................


SSS

S

STT


S
S
TT
T
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   416...420.........430.........440.........450.........460.........470.......
 
   765....770... ....
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Query Sequence  PPVPPRFPT. CGDH
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Template Conservation     
      
   
Template Sequence  NPVPEAWSNLCPSY
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   478.480.........490.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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