Return to main results Retrieve Phyre Job Id

Job DescriptionB7YZT1
Confidence98.58%DateTue Jan 22 11:31:19 GMT 2013
Rank93Aligned Residues108
% Identity12%Templatec3ay2A_
PDB info PDB header:antitumor protein, antiviral proteinChain: A: PDB Molecule:lipid modified azurin protein; PDBTitle: crystal structure of neisserial azurin
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   640..... ....650.........660.........670.........680.........690.........700.........710........
Predicted Secondary structure 
.





















































Query SS confidence 





.








































































Query Sequence  THMVDI. PLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALELDQMGMLERHFSKPPLKDTI
Query Conservation    

 
.  
 





 
        







 
 


 
                  
       

 


 



Alig confidence 





.














...











.........

































Template Conservation 
  
 
 
 
  
 
 
 
 
 ...  
    

  
.........                                
 
Template Sequence  TKDIQVSKACKEFTITLKHTGT. . . QPKASMGHNLVI. . . . . . . . . AKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTK
Template Known Secondary structure 
STT
SS
S
...S

B

.........GGGGGGGGGTTS
TT
TT

Template Predicted Secondary structure 









...







.........





















Template SS confidence 















































































   73......80.........90.... .....100...... ...110.........120.........130.........140
 
   719720.........730.. .......740.........750.........760
Predicted Secondary structure 




..










Query SS confidence 













. .



























Query Sequence  AVPNNGYVVIRFRA. . DNPGYWLFHCHFLFHIVIGMNLIFHIGT
Query Conservation   




 




 
..



 







 
   

  

 

 
Alig confidence 













..















.










Template Conservation   
 



  


       
 
 
 





 . 

 
 
 
 
Template Sequence  LIGGGEESSLTLDPAKLADGDYKFACTFPGHG. ALMNGKVTLVD
Template Known Secondary structure 
B
TT

GGGGTTS


STTGG.GTS
Template Predicted Secondary structure 
















.



Template SS confidence 











































   141........150.........160.........170.. .......180...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions