Return to main results Retrieve Phyre Job Id

Job DescriptionB7YZT1
Confidence77.19%DateTue Jan 22 11:31:19 GMT 2013
Rank145Aligned Residues72
% Identity19%Templatec1qleB_
PDB info PDB header:oxidoreductase/immune systemChain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   626...630.........640.........650.........660.........670.........680.........690.........700.....
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Query Sequence  GDNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALELDQMGML
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Template Sequence  ADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATDVI. . . . . . . . . . . HAWTI. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGT

GGGSSS
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   145....150.........160.........170.........180 .....
 
   706...710.........720.........730.........740..
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Query Sequence  ERHFSKPPLKDTIAVPNNGYVVIRFRADNPGYWLFHC
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Template Sequence  . . . . . . PAFAVKQDAVPGRIAQLWFSVDQEGVYFGQC
Template Known Secondary structure  ......TTTT
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B



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   186...190.........200.........210......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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