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Job DescriptionB7YZT1
Confidence100.00%DateTue Jan 22 11:31:19 GMT 2013
Rank35Aligned Residues234
% Identity33%Templatec3cg8B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:laccase; PDBTitle: laccase from streptomyces coelicolor
Resolution2.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230... ......240.........250.........260.........270.........280.........290.........300......
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Query Sequence  LADGVE. RGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWT
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Template Sequence  LADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMD. VRASLHVHGLDYEIS. . SDGTA. MNKSDVEPGGTRTYTWR
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TTS
SSTT

BSS


TT

SS.S
B

SSSB

GG..GS

T.TTT
SB
TT
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   58.60.........70.........80.........90...... ...100.........110. ..... ...120.........130...
 
   307. .310....... ..320.........330.........340.........350.........360......
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Query Sequence  GN. . . . . . . . . . . . . . AGTHFWHAH. . . . . . TGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAE
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Template Sequence  THKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDATH. . . . . . . . TIVFNDMT. . . . . .
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TTS


S

SSSSSTT
T

TT



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   134.....140.........150.........160.........170.........180.........190. ........
 
   367..370.........380.........390.........400.........410.........420.........430.........440......
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Query Sequence  RYPGRLAVNTGQDPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDGE
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Template Sequence  . . . . . . . . . . . . . . . . . . INNR. . . . . . . . . . . KPHTGPDFEATVGDRVEIVMITHGEYY. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ..................TT
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TT


TT
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   200... ......210.........220.........230
 
   447..450.........460.........470.........480.........490.........500.........510.........520......
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Query Sequence  PVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNP
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   527..530.........540.........550.........560.........570.........580.........590.........600......
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Query Sequence  LDAICDRKRADAVCVSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYIS
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   607..610.........620.........630.........640.........650.........660.........670.........680......
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Query Sequence  PPAPPLSQIDDIPPEYFCNGDNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HTFHMHGHRWADNRTGILTGP
Template Known Secondary structure  ...........................................................TT

SSSSSS

ST
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   231........240.........250.
 
   687..690.........700.........710.........720.........730... ......740.........750.........760. .
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Query Sequence  SIKKINLKHALELDQMGMLERHFSKPPLKDTIAVPNNGYVVIRFRAD. . . NPGYWLFHCHFLFHIVIGMNLIFHIGTT. A
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Template Sequence  DDP. . . . . . . . . . . . . . . . . . . . . . SRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG
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TT
TTTTT
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STT

TTS
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   252.. .....260.........270.........280.........290.........300.........
 
   763......
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Query Sequence  DLPPVPP
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Template Conservation    
   
Template Sequence  TIPGYEP
Template Known Secondary structure 
BTTB

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   310......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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